Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 MTCO3P16-201ENST00000454456 754 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AC018638.3-201ENST00000461273 132 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AC110749.1-201ENST00000462007 357 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 RPL23AP12-201ENST00000467573 473 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 RPS18P6-201ENST00000476880 458 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AC006499.3-201ENST00000506077 748 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AC106806.2-201ENST00000509365 500 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 BTF3P13-201ENST00000513224 490 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 RN7SKP276-201ENST00000516242 268 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 HAUS8P1-201ENST00000549005 542 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 SUMO2P15-201ENST00000604285 278 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AP002371.2-201ENST00000624450 503 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AC008013.2-202ENST00000637965 364 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AC074029.4-201ENST00000624796 1859 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 AC010329.2-201ENST00000595195 2737 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 PABPC1P6-201ENST00000445594 1829 ntBASIC4.28□□□□□ -1.72
VIPAS39Q9H9C1 RNF6P1-201ENST00000444889 1784 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AC090017.1-201ENST00000548612 1779 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 PHKBP1-201ENST00000450951 1951 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AL592494.2-201ENST00000425455 1548 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 RNU6-984P-201ENST00000363236 109 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 FAR2P2-201ENST00000413041 594 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 NPM1P34-201ENST00000428821 893 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 RPL23AP81-201ENST00000455252 467 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 CYCSP20-201ENST00000473154 315 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AC010627.1-201ENST00000503819 1294 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 HMGN1P15-201ENST00000513870 295 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AC112206.4-201ENST00000515142 405 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 OR5AK3P-201ENST00000527486 1297 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AC008033.2-201ENST00000542626 177 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AC020910.2-201ENST00000603635 610 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AC120053.1-201ENST00000607706 736 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AC024023.1-201ENST00000624530 922 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 AL355480.1-201ENST00000629041 99 ntBASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VIPAS39Q9H9C1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VIPAS39Q9H9C1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.26□□□□□ -1.73
VIPAS39Q9H9C1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
VIPAS39Q9H9C1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VIPAS39Q9H9C1 RNU6-317P-201ENST00000384031 107 ntBASIC4.26□□□□□ -1.73
VIPAS39Q9H9C1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VIPAS39Q9H9C1 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.26□□□□□ -1.73
VIPAS39Q9H9C1 RNA5SP113-201ENST00000410486 84 ntBASIC4.26□□□□□ -1.73
VIPAS39Q9H9C1 RN7SKP100-201ENST00000411258 284 ntBASIC4.26□□□□□ -1.73
VIPAS39Q9H9C1 AC013404.1-201ENST00000413068 249 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms