Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 OR4K17-201ENST00000315543 1032 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 U3.15-201ENST00000365398 212 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 RNA5SP39-201ENST00000411245 120 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC011933.1-201ENST00000413334 321 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 FTH1P6-201ENST00000430768 320 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AL645939.1-201ENST00000453429 797 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC009963.2-201ENST00000453431 138 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC116533.1-201ENST00000459748 321 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC008958.1-201ENST00000511047 682 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC090281.1-201ENST00000523019 276 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 MIR5096-201ENST00000583713 70 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC069304.3-201ENST00000603938 1084 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC026368.1-201ENST00000614934 690 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AL121873.1-201ENST00000616013 524 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC009032.1-201ENST00000617574 431 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AP005264.7-201ENST00000625003 745 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 AC139713.2-214ENST00000642059 1811 ntBASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC40Q9H9A6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 MTND4P31-201ENST00000425607 1343 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AL035696.2-201ENST00000407941 709 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AP000357.1-201ENST00000409926 1165 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AC004022.2-201ENST00000413824 193 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 MTND2P21-201ENST00000436242 1042 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 CBX1P1-201ENST00000440184 427 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 TPTE2P6-202ENST00000445572 1007 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AC104306.1-201ENST00000449702 371 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 RPL36AP13-201ENST00000457490 317 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 RN7SL738P-201ENST00000470264 297 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AC025554.1-201ENST00000505641 188 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AC025674.1-201ENST00000507074 324 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AC105233.3-201ENST00000531125 744 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AL121594.4-201ENST00000556211 1196 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 MIR4330-201ENST00000579077 105 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 MIR4443-201ENST00000585052 53 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 SUMO2P14-201ENST00000604488 293 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 AC099669.2-201ENST00000616549 437 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 U6.48-201ENST00000618523 106 ntBASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LRRC40Q9H9A6 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 RNU1-132P-201ENST00000364300 164 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 RNA5SP509-201ENST00000364577 119 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AL589655.1-201ENST00000405398 482 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 Z86062.1-201ENST00000406773 777 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 RN7SKP177-201ENST00000410567 355 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AC010385.1-201ENST00000412374 256 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms