Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AL672167.1-206ENST00000356293 943 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 RN7SKP115-201ENST00000363177 317 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 SNORA4.1-201ENST00000364263 144 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 RNU6-225P-201ENST00000384613 103 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AL133270.1-201ENST00000402635 279 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 RPL37P18-201ENST00000411602 243 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 RPL31P54-201ENST00000429803 370 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 RPS24P1-201ENST00000438550 371 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 PTMAP6-201ENST00000439110 327 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AC019185.1-201ENST00000442718 389 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 CYCSP24-201ENST00000445119 316 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 NOP56P2-201ENST00000447491 769 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 RNU6-956P-201ENST00000458868 103 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 RN7SL814P-201ENST00000487715 300 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 ATP1B1P1-201ENST00000509767 915 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 RNA5SP135-201ENST00000517019 125 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 MTND1P5-201ENST00000517906 940 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AC022360.1-201ENST00000521058 340 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 OR5AK1P-201ENST00000524837 922 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AP004607.2-201ENST00000533949 322 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AC005962.2-201ENST00000611427 652 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AC008115.3-201ENST00000614874 549 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 uc_338.9-201ENST00000617424 182 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 AC068870.3-201ENST00000625077 2536 ntBASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.94□□□□□ -1.62
AMBRA1Q9C0C7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AL590763.1-201ENST00000398297 1545 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 UBBP2-201ENST00000376781 231 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 SNORA51.12-201ENST00000384448 134 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 Y_RNA.625-201ENST00000411256 107 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 PIGPP2-201ENST00000411569 458 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 TPMTP3-201ENST00000411928 735 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AL450992.3-201ENST00000413192 568 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 OR6E1P-201ENST00000414424 923 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 C4BPAP1-201ENST00000415474 1893 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 MTCO2P34-201ENST00000421994 607 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC092017.2-201ENST00000427600 362 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 SKP1P3-201ENST00000429280 487 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 RPL34P6-201ENST00000432390 345 ntBASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.93□□□□□ -1.62
AMBRA1Q9C0C7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms