Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 snoU109.6-201ENST00000516831 118 ntBASIC4.22□□□□□ -1.73
TRIM4Q9C037 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.22□□□□□ -1.73
TRIM4Q9C037 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.22□□□□□ -1.73
TRIM4Q9C037 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM4Q9C037 AC008739.3-201ENST00000603262 127 ntBASIC4.22□□□□□ -1.73
TRIM4Q9C037 AL391261.4-201ENST00000616012 481 ntBASIC4.22□□□□□ -1.73
TRIM4Q9C037 AC007546.1-201ENST00000619452 559 ntBASIC4.22□□□□□ -1.73
TRIM4Q9C037 AP003497.2-201ENST00000624220 967 ntBASIC4.22□□□□□ -1.73
TRIM4Q9C037 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM4Q9C037 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM4Q9C037 AC066616.2-201ENST00000559334 1481 ntBASIC4.22□□□□□ -1.73
TRIM4Q9C037 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM4Q9C037 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM4Q9C037 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 MIR383-201ENST00000362257 73 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 MIR200C-201ENST00000384980 68 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 OR1F12-201ENST00000402365 945 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 Z98745.1-201ENST00000402553 494 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 SNORA74C-2-201ENST00000411179 201 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 TMSB10P2-201ENST00000416049 131 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 AL139095.3-201ENST00000419672 1203 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 AC062016.2-201ENST00000420950 676 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 ARAFP1-201ENST00000422172 605 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM4Q9C037 MTND4LP12-201ENST00000448237 295 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 PRSS3P4-201ENST00000453323 162 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 ANP32BP2-201ENST00000454525 545 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 AP000926.1-201ENST00000479573 241 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 AC025554.1-201ENST00000505641 188 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 AC108475.1-201ENST00000507880 950 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM4Q9C037 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 Z82195.1-201ENST00000604558 398 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 AL160290.3-201ENST00000604869 165 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 MIR432-201ENST00000606207 94 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 AL159169.2-201ENST00000610061 1269 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 MIR6875-201ENST00000617506 72 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 AC090506.2-201ENST00000624521 419 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 MIR3653-201ENST00000625572 110 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 MIR492-201ENST00000638676 116 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 ERCC6-202ENST00000374127 1782 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM4Q9C037 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM4Q9C037 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM4Q9C037 RPS4XP5-202ENST00000449995 1334 ntBASIC4.21□□□□□ -1.74
TRIM4Q9C037 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM4Q9C037 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM4Q9C037 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 AC090017.1-201ENST00000548612 1779 ntBASIC4.2□□□□□ -1.74
TRIM4Q9C037 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM4Q9C037 RNA5SP307-201ENST00000362863 116 ntBASIC4.2□□□□□ -1.74
TRIM4Q9C037 AC093719.1-202ENST00000392735 373 ntBASIC4.2□□□□□ -1.74
TRIM4Q9C037 SDHCP2-201ENST00000398565 501 ntBASIC4.2□□□□□ -1.74
TRIM4Q9C037 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 FTH1P6-201ENST00000430768 320 ntBASIC4.2□□□□□ -1.74
TRIM4Q9C037 AL356535.1-201ENST00000440335 398 ntBASIC4.2□□□□□ -1.74
TRIM4Q9C037 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 RNU7-170P-201ENST00000459303 61 ntBASIC4.2□□□□□ -1.74
TRIM4Q9C037 AC069499.1-201ENST00000489433 509 ntBASIC4.2□□□□□ -1.74
TRIM4Q9C037 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 AC067838.1-201ENST00000606064 577 ntBASIC4.2□□□□□ -1.74
TRIM4Q9C037 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 HSPD1P11-201ENST00000508643 1702 ntBASIC4.2□□□□□ -1.74
TRIM4Q9C037 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
TRIM4Q9C037 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.2□□□□□ -1.74
TRIM4Q9C037 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM4Q9C037 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM4Q9C037 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms