Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 PNPT1P2-201ENST00000456768 2050 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 AL080317.3-201ENST00000607434 4315 ntBASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC6.51□□□□□ -1.37
COL25A1Q9BXS0 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AC005224.3-201ENST00000584683 2140 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AC009962.1-201ENST00000567327 3813 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AC112255.1-201ENST00000624070 2493 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AC009948.5-201ENST00000624360 4406 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 Y_RNA.180-201ENST00000363867 113 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 RNA5SP500-201ENST00000364486 119 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 SNORD113-1-201ENST00000365321 69 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 Y_RNA.515-201ENST00000384535 112 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 SNORA11.2-201ENST00000408318 127 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 METTL15P3-201ENST00000415522 1221 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AC245028.1-201ENST00000423259 256 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 OR2AS1P-201ENST00000427827 319 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 RPL34P27-201ENST00000428810 349 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AL121871.1-201ENST00000443413 436 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 PCMTD1P1-201ENST00000455560 355 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AL163973.1-201ENST00000484753 577 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 NARSP2-201ENST00000518524 679 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 RPL7P20-201ENST00000520308 745 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AP003072.2-201ENST00000527756 676 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 ATP5J2P6-201ENST00000565203 266 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 MIR548AI-201ENST00000579940 88 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AL683813.2-201ENST00000605245 502 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 SAMMSON-213ENST00000641336 1521 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 ASNSP3-201ENST00000451989 1306 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 AC011379.1-201ENST00000508713 3025 ntBASIC6.5□□□□□ -1.37
COL25A1Q9BXS0 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AC016583.1-201ENST00000624221 2431 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 PHF2P2-202ENST00000444553 2865 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 RBMY1HP-201ENST00000382759 1389 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 Y_RNA.25-201ENST00000362528 102 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 RNU6-777P-201ENST00000364265 104 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 SNORA62-201ENST00000365493 153 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 RNU6-1040P-201ENST00000383974 107 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 RNU6-1013P-201ENST00000384180 107 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms