Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSBP3Q9BWW4 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSBP3Q9BWW4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSBP3Q9BWW4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSBP3Q9BWW4 MTCO1P9-201ENST00000505577 1534 ntBASIC5.01□□□□□ -1.61
SSBP3Q9BWW4 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.01□□□□□ -1.61
SSBP3Q9BWW4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSBP3Q9BWW4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SSBP3Q9BWW4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.01□□□□□ -1.61
SSBP3Q9BWW4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSBP3Q9BWW4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SSBP3Q9BWW4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.01□□□□□ -1.61
SSBP3Q9BWW4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SSBP3Q9BWW4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSBP3Q9BWW4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SSBP3Q9BWW4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSBP3Q9BWW4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AL359922.3-201ENST00000624779 1670 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 OR4A15-201ENST00000314706 1035 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 Y_RNA.216-201ENST00000364205 93 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 RNU6-619P-201ENST00000365146 108 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 RNU6-533P-201ENST00000384144 107 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 RNU6-185P-201ENST00000384421 107 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 RNU6-1122P-201ENST00000384449 107 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 MIR606-201ENST00000384851 96 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 AL589647.1-201ENST00000402485 466 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AL356432.1-201ENST00000405809 419 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 RPS3P2-201ENST00000421346 701 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 NMD3P2-201ENST00000421815 761 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 USP9YP36-201ENST00000424581 829 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 RPL7P56-201ENST00000429441 717 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC018644.1-201ENST00000429934 551 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 AL365400.1-201ENST00000431854 640 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC009961.2-201ENST00000435771 251 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 RPL31P15-201ENST00000449770 338 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 MTND6P2-201ENST00000512226 524 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 Y_RNA.667-201ENST00000516212 107 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 RNA5SP271-201ENST00000516700 88 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 RNA5SP135-201ENST00000517019 125 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 OR5D2P-201ENST00000524390 911 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 TRIM51DP-201ENST00000529746 596 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 SLC2A13P1-201ENST00000531560 322 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC243972.3-201ENST00000539655 198 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC011611.1-201ENST00000552179 197 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC007494.1-201ENST00000562293 760 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC243960.4-201ENST00000600532 288 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC106900.2-201ENST00000604994 317 ntBASIC5□□□□□ -1.61
SSBP3Q9BWW4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSBP3Q9BWW4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSBP3Q9BWW4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SSBP3Q9BWW4 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSBP3Q9BWW4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSBP3Q9BWW4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5□□□□□ -1.61
SSBP3Q9BWW4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SSBP3Q9BWW4 GDI2P1-201ENST00000429312 1336 ntBASIC4.99□□□□□ -1.61
SSBP3Q9BWW4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSBP3Q9BWW4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SSBP3Q9BWW4 MTND5P23-201ENST00000430812 1655 ntBASIC4.99□□□□□ -1.61
SSBP3Q9BWW4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SSBP3Q9BWW4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC4.99□□□□□ -1.61
SSBP3Q9BWW4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms