Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.66□□□□□ -1.82
VGLL1Q99990 HMGB1P1-201ENST00000522557 636 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.66□□□□□ -1.82
VGLL1Q99990 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VGLL1Q99990 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.66□□□□□ -1.82
VGLL1Q99990 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC3.66□□□□□ -1.82
VGLL1Q99990 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.66□□□□□ -1.82
VGLL1Q99990 GSTP1P1-201ENST00000548078 319 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 AC025260.1-201ENST00000548858 430 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.66□□□□□ -1.82
VGLL1Q99990 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VGLL1Q99990 CYP2C60P-201ENST00000566088 139 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 MTCYBP33-201ENST00000575007 1130 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.66□□□□□ -1.82
VGLL1Q99990 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.66□□□□□ -1.82
VGLL1Q99990 DPRXP5-201ENST00000604662 539 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 AL512329.2-201ENST00000607350 548 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
VGLL1Q99990 AL603755.1-201ENST00000619504 163 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 AC055839.1-201ENST00000634467 498 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 AC068620.4-201ENST00000636730 1182 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 GTF2H2B-203ENST00000508065 1432 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 AC021755.1-201ENST00000559747 1447 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.66□□□□□ -1.82
VGLL1Q99990 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VGLL1Q99990 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VGLL1Q99990 AC138393.1-206ENST00000540997 1886 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC3.66□□□□□ -1.82
VGLL1Q99990 AC108751.5-201ENST00000492880 1336 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 AC000367.1-201ENST00000452711 1766 ntBASIC3.66□□□□□ -1.82
VGLL1Q99990 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VGLL1Q99990 AC008758.3-201ENST00000507003 1829 ntBASIC3.65□□□□□ -1.82
VGLL1Q99990 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.65□□□□□ -1.82
VGLL1Q99990 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VGLL1Q99990 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VGLL1Q99990 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
VGLL1Q99990 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.65□□□□□ -1.82
VGLL1Q99990 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VGLL1Q99990 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VGLL1Q99990 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VGLL1Q99990 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
VGLL1Q99990 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VGLL1Q99990 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
VGLL1Q99990 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VGLL1Q99990 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
VGLL1Q99990 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.65□□□□□ -1.83
VGLL1Q99990 MIR448-201ENST00000362131 111 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
VGLL1Q99990 RNU6-157P-201ENST00000383957 107 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 RNU6-98P-201ENST00000384173 107 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 RNU6-1320P-201ENST00000390838 107 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 RNU6-1269P-201ENST00000391139 107 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VGLL1Q99990 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.65□□□□□ -1.83
VGLL1Q99990 MIR1286-201ENST00000408112 78 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 AP000357.1-201ENST00000409926 1165 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 RNU6-575P-201ENST00000411326 105 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.65□□□□□ -1.83
VGLL1Q99990 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.65□□□□□ -1.83
VGLL1Q99990 TBCAP2-201ENST00000416175 326 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.65□□□□□ -1.83
VGLL1Q99990 DDX39BP1-205ENST00000422507 192 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.65□□□□□ -1.83
VGLL1Q99990 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.65□□□□□ -1.83
VGLL1Q99990 OR52B5P-201ENST00000435337 951 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 HMGB1P45-201ENST00000435986 653 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.65□□□□□ -1.83
VGLL1Q99990 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.65□□□□□ -1.83
VGLL1Q99990 AC000111.2-201ENST00000448200 210 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 AC104978.1-201ENST00000449387 391 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.65□□□□□ -1.83
VGLL1Q99990 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VGLL1Q99990 AL121877.1-201ENST00000453704 622 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 AL445669.2-201ENST00000454425 421 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.65□□□□□ -1.83
VGLL1Q99990 RNU6-599P-201ENST00000459383 107 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 RNU6-1193P-201ENST00000459461 107 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.65□□□□□ -1.83
VGLL1Q99990 AC097484.1-201ENST00000471148 389 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 COPS8P2-201ENST00000473228 627 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.65□□□□□ -1.83
VGLL1Q99990 RAP1BP2-201ENST00000478270 544 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.65□□□□□ -1.83
VGLL1Q99990 RN7SL244P-201ENST00000493405 297 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 AC084024.2-201ENST00000503480 791 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 AC024558.1-201ENST00000505008 528 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.65□□□□□ -1.83
VGLL1Q99990 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.65□□□□□ -1.83
VGLL1Q99990 COX6B1P5-201ENST00000509843 249 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 MTND1P22-201ENST00000510572 951 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.65□□□□□ -1.83
VGLL1Q99990 RPL7L1P4-201ENST00000513004 707 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 RNA5SP43-201ENST00000516559 110 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 RNU6-709P-201ENST00000517257 104 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.65□□□□□ -1.83
VGLL1Q99990 AP003461.1-201ENST00000528866 78 ntBASIC3.65□□□□□ -1.83
VGLL1Q99990 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VGLL1Q99990 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.65□□□□□ -1.83
VGLL1Q99990 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms