Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SIN3AQ96ST3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 SCN1A-220ENST00000641603 12506 ntBASIC5.67□□□□□ -1.5
SIN3AQ96ST3 RN7SKP227-201ENST00000364445 330 ntBASIC5.67□□□□□ -1.5
SIN3AQ96ST3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 OR4F13P-201ENST00000428478 931 ntBASIC5.67□□□□□ -1.5
SIN3AQ96ST3 AC073508.1-201ENST00000428866 656 ntBASIC5.67□□□□□ -1.5
SIN3AQ96ST3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 HMGB3P22-202ENST00000451823 572 ntBASIC5.67□□□□□ -1.5
SIN3AQ96ST3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 RN7SL271P-201ENST00000487601 295 ntBASIC5.67□□□□□ -1.5
SIN3AQ96ST3 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 CKS1BP1-201ENST00000555221 240 ntBASIC5.67□□□□□ -1.5
SIN3AQ96ST3 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 AC012213.4-201ENST00000606457 354 ntBASIC5.67□□□□□ -1.5
SIN3AQ96ST3 AP006248.3-201ENST00000623580 594 ntBASIC5.67□□□□□ -1.5
SIN3AQ96ST3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SIN3AQ96ST3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 AP002001.2-201ENST00000529025 1469 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 RNU6-1176P-201ENST00000390955 107 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 MIR1251-201ENST00000408552 70 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 RN7SKP263-201ENST00000411194 309 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 CBX1P3-201ENST00000413296 527 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 RPL7AP73-201ENST00000413490 353 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 NPM1P34-201ENST00000428821 893 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 AP002345.1-201ENST00000456493 928 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 OR9M1P-201ENST00000459641 921 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 EIF2S2P4-201ENST00000461070 984 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 AL672167.3-201ENST00000465951 960 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 AC090543.1-201ENST00000492168 485 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 FABP5P6-201ENST00000510588 409 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 AC026726.1-201ENST00000512859 601 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 RNU6-889P-201ENST00000517189 103 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 MIR2116-201ENST00000517221 80 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 OR4V1P-201ENST00000525394 1140 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 AL133247.2-201ENST00000603236 482 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 AC233280.2-201ENST00000603917 1070 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 AC099676.1-201ENST00000608886 657 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 AC006249.1-201ENST00000621223 471 ntBASIC5.66□□□□□ -1.5
SIN3AQ96ST3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SIN3AQ96ST3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 MIR30B-201ENST00000384850 88 ntBASIC5.65□□□□□ -1.5
SIN3AQ96ST3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 RNU6-628P-201ENST00000410675 107 ntBASIC5.65□□□□□ -1.5
SIN3AQ96ST3 AL445213.1-201ENST00000412589 747 ntBASIC5.65□□□□□ -1.5
SIN3AQ96ST3 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 AC013410.2-201ENST00000422627 201 ntBASIC5.65□□□□□ -1.5
SIN3AQ96ST3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 XKRY2-201ENST00000442362 1093 ntBASIC5.65□□□□□ -1.5
SIN3AQ96ST3 MTND6P5-201ENST00000448266 512 ntBASIC5.65□□□□□ -1.5
SIN3AQ96ST3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 AC015908.1-201ENST00000478739 476 ntBASIC5.65□□□□□ -1.5
SIN3AQ96ST3 AC139783.2-201ENST00000504847 1145 ntBASIC5.65□□□□□ -1.5
SIN3AQ96ST3 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.65□□□□□ -1.5
SIN3AQ96ST3 AC067904.2-201ENST00000517322 1283 ntBASIC5.65□□□□□ -1.5
SIN3AQ96ST3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 AL121839.1-201ENST00000556233 1185 ntBASIC5.65□□□□□ -1.5
SIN3AQ96ST3 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 CDRT1-208ENST00000630868 794 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms