Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 DMD-228ENST00000541735 7080 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC009237.3-203ENST00000442128 3551 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 SNORA63.3-201ENST00000362682 132 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RNU6-936P-201ENST00000384005 107 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 MIR554-201ENST00000384874 96 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RNU6-651P-201ENST00000411040 105 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 OR6C64P-201ENST00000419708 825 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 USP9YP11-201ENST00000427537 717 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 C8orf59P1-201ENST00000429930 303 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RPL12P46-201ENST00000436610 195 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 USP9YP34-201ENST00000453983 808 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 HMGB1P4-201ENST00000455362 567 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 SETP4-201ENST00000455717 868 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC010326.1-201ENST00000462726 602 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC079171.1-201ENST00000568788 914 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL359704.2-201ENST00000604335 521 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC079791.1-201ENST00000605356 973 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC103710.3-201ENST00000608157 948 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL451074.6-201ENST00000608512 729 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC138627.2-201ENST00000624202 601 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC023824.7-201ENST00000623041 5731 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 Z97832.2-201ENST00000605896 4261 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ST8SIA3-201ENST00000324000 11833 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 NLRC5-201ENST00000262510 6822 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 MIR494-201ENST00000349529 81 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 Y_RNA.194-201ENST00000363985 102 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RNU4-2-201ENST00000365668 141 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 PPIAP31-201ENST00000405422 495 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 PTGES3P2-201ENST00000407942 482 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RNU6-735P-201ENST00000410612 107 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RNU2-64P-201ENST00000411315 191 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC019070.1-201ENST00000415008 1024 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC004074.1-201ENST00000421810 1063 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC245452.2-201ENST00000435222 392 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 NPM1P51-201ENST00000443470 744 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 HSFY6P-201ENST00000445573 403 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 EXOSC3P1-201ENST00000448649 500 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC093720.1-201ENST00000505681 714 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC110792.2-201ENST00000510278 224 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms