Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-CQ95604 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.05□□□□□ -1.28
HLA-CQ95604 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-CQ95604 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.05□□□□□ -1.28
HLA-CQ95604 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-CQ95604 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-CQ95604 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-CQ95604 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-CQ95604 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-CQ95604 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-CQ95604 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-CQ95604 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-CQ95604 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-CQ95604 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.04□□□□□ -1.28
HLA-CQ95604 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-CQ95604 AC109780.1-201ENST00000451768 1344 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.04□□□□□ -1.28
HLA-CQ95604 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
HLA-CQ95604 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
HLA-CQ95604 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-CQ95604 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.04□□□□□ -1.28
HLA-CQ95604 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-CQ95604 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-CQ95604 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 AC009902.3-201ENST00000606235 2172 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 RNU5A-8P-201ENST00000364102 114 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 SNORA62.1-201ENST00000364287 154 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 RNU6-99P-201ENST00000364721 107 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC7.04□□□□□ -1.28
HLA-CQ95604 Y_RNA.552-201ENST00000384665 112 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 PRRC2CP1-201ENST00000404428 159 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.04□□□□□ -1.28
HLA-CQ95604 RNU4-6P-201ENST00000410804 122 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 RNU2-64P-201ENST00000411315 191 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 AL603650.1-201ENST00000412680 240 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 AL591848.1-201ENST00000413092 322 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 AL356968.1-201ENST00000416622 474 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 ACTR3BP6-201ENST00000422332 1241 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC7.04□□□□□ -1.28
HLA-CQ95604 MTATP6P16-201ENST00000434543 526 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 GAPDHP33-201ENST00000443168 1013 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 AC007998.1-201ENST00000474156 672 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 FTH1P21-201ENST00000512179 511 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 AC108471.1-201ENST00000513977 287 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 AC120036.3-201ENST00000517826 292 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 AC112191.2-201ENST00000522428 333 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.04□□□□□ -1.28
HLA-CQ95604 AP005119.1-201ENST00000580956 292 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 NPIPB1P-202ENST00000588786 828 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-CQ95604 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-CQ95604 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC7.04□□□□□ -1.28
HLA-CQ95604 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-CQ95604 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
HLA-CQ95604 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-CQ95604 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC7.04□□□□□ -1.28
HLA-CQ95604 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.04□□□□□ -1.28
HLA-CQ95604 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-CQ95604 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-CQ95604 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
HLA-CQ95604 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC7.03□□□□□ -1.28
HLA-CQ95604 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-CQ95604 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-CQ95604 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-CQ95604 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
HLA-CQ95604 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-CQ95604 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-CQ95604 ANAPC1P1-201ENST00000426186 2145 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-CQ95604 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-CQ95604 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.03□□□□□ -1.28
HLA-CQ95604 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
HLA-CQ95604 SNORD3E-201ENST00000362899 217 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 Y_RNA.378-201ENST00000365652 113 ntBASIC7.03□□□□□ -1.28
HLA-CQ95604 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms