Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
AP3S1Q92572 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
AP3S1Q92572 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.47□□□□□ -1.85
AP3S1Q92572 MTND5P21-201ENST00000531961 522 ntBASIC3.47□□□□□ -1.85
AP3S1Q92572 AC090877.1-201ENST00000561418 344 ntBASIC3.47□□□□□ -1.85
AP3S1Q92572 UBE2FP2-201ENST00000566646 462 ntBASIC3.47□□□□□ -1.85
AP3S1Q92572 MIR4425-201ENST00000580572 84 ntBASIC3.47□□□□□ -1.85
AP3S1Q92572 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.47□□□□□ -1.85
AP3S1Q92572 MIR4737-201ENST00000583979 81 ntBASIC3.47□□□□□ -1.85
AP3S1Q92572 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.47□□□□□ -1.85
AP3S1Q92572 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.47□□□□□ -1.85
AP3S1Q92572 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.47□□□□□ -1.85
AP3S1Q92572 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.47□□□□□ -1.85
AP3S1Q92572 AL390816.3-201ENST00000604527 1066 ntBASIC3.47□□□□□ -1.85
AP3S1Q92572 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.47□□□□□ -1.85
AP3S1Q92572 AC087385.3-201ENST00000620477 187 ntBASIC3.47□□□□□ -1.85
AP3S1Q92572 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
AP3S1Q92572 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
AP3S1Q92572 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
AP3S1Q92572 AP001148.1-201ENST00000624124 2359 ntBASIC3.47□□□□□ -1.85
AP3S1Q92572 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.47□□□□□ -1.85
AP3S1Q92572 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
AP3S1Q92572 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
AP3S1Q92572 AC109780.1-201ENST00000451768 1344 ntBASIC3.46□□□□□ -1.85
AP3S1Q92572 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
AP3S1Q92572 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
AP3S1Q92572 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
AP3S1Q92572 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
AP3S1Q92572 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
AP3S1Q92572 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.46□□□□□ -1.86
AP3S1Q92572 SNORD113.2-201ENST00000364166 89 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 AL049697.2-201ENST00000403708 294 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 AL391417.1-201ENST00000404100 426 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 SNORA57.3-201ENST00000411095 141 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.46□□□□□ -1.86
AP3S1Q92572 RPL31P45-201ENST00000419532 356 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 MFSD13B-201ENST00000420133 1290 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
AP3S1Q92572 ELOCP6-201ENST00000429066 328 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 HIGD1AP4-201ENST00000430194 280 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 ARF4P2-201ENST00000430209 526 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.46□□□□□ -1.86
AP3S1Q92572 PHBP16-201ENST00000446318 950 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 EIF2S2P2-201ENST00000447161 982 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 ELOCP12-201ENST00000458706 328 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 RNA5SP246-201ENST00000458909 119 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 AL049830.2-201ENST00000480072 201 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 TRBV12-2-201ENST00000489763 344 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.46□□□□□ -1.86
AP3S1Q92572 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.46□□□□□ -1.86
AP3S1Q92572 RNA5SP519-201ENST00000516480 119 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.46□□□□□ -1.86
AP3S1Q92572 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
AP3S1Q92572 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.46□□□□□ -1.86
AP3S1Q92572 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.46□□□□□ -1.86
AP3S1Q92572 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.46□□□□□ -1.86
AP3S1Q92572 MIR5047-201ENST00000579212 100 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 AC022146.1-201ENST00000595307 847 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 AC008782.1-201ENST00000603386 430 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 AL161912.3-201ENST00000605404 628 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 RMST_8.1-201ENST00000610287 165 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.46□□□□□ -1.86
AP3S1Q92572 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.46□□□□□ -1.86
AP3S1Q92572 AC119744.1-201ENST00000454746 1715 ntBASIC3.46□□□□□ -1.86
AP3S1Q92572 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.46□□□□□ -1.86
AP3S1Q92572 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
AP3S1Q92572 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
AP3S1Q92572 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
AP3S1Q92572 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.45□□□□□ -1.86
AP3S1Q92572 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.45□□□□□ -1.86
AP3S1Q92572 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.45□□□□□ -1.86
AP3S1Q92572 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
AP3S1Q92572 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.45□□□□□ -1.86
AP3S1Q92572 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.45□□□□□ -1.86
AP3S1Q92572 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.45□□□□□ -1.86
AP3S1Q92572 RPS17P13-201ENST00000448974 407 ntBASIC3.45□□□□□ -1.86
AP3S1Q92572 AC006539.3-201ENST00000454258 129 ntBASIC3.45□□□□□ -1.86
AP3S1Q92572 RPL7P32-201ENST00000457119 744 ntBASIC3.45□□□□□ -1.86
AP3S1Q92572 AC006511.1-201ENST00000470614 315 ntBASIC3.45□□□□□ -1.86
AP3S1Q92572 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
AP3S1Q92572 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.45□□□□□ -1.86
AP3S1Q92572 RPSAP50-201ENST00000481955 852 ntBASIC3.45□□□□□ -1.86
AP3S1Q92572 AC078817.1-201ENST00000492623 435 ntBASIC3.45□□□□□ -1.86
AP3S1Q92572 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC3.45□□□□□ -1.86
AP3S1Q92572 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.45□□□□□ -1.86
AP3S1Q92572 OR5H4P-201ENST00000510851 923 ntBASIC3.45□□□□□ -1.86
AP3S1Q92572 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
AP3S1Q92572 RNU2-58P-201ENST00000516403 183 ntBASIC3.45□□□□□ -1.86
AP3S1Q92572 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.45□□□□□ -1.86
AP3S1Q92572 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.45□□□□□ -1.86
AP3S1Q92572 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.45□□□□□ -1.86
AP3S1Q92572 RBM7-208ENST00000545678 867 ntTSL 3 BASIC3.45□□□□□ -1.86
AP3S1Q92572 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.45□□□□□ -1.86
AP3S1Q92572 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.45□□□□□ -1.86
AP3S1Q92572 ZNF192P1-203ENST00000565888 810 ntBASIC3.45□□□□□ -1.86
AP3S1Q92572 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
AP3S1Q92572 AC115286.1-201ENST00000604298 434 ntBASIC3.45□□□□□ -1.86
AP3S1Q92572 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.45□□□□□ -1.86
AP3S1Q92572 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms