Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC008945.2-201ENST00000606056 604 ntBASIC5.91□□□□□ -1.46
DDX1Q92499 AC007497.1-201ENST00000610421 561 ntBASIC5.91□□□□□ -1.46
DDX1Q92499 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.91□□□□□ -1.46
DDX1Q92499 AC072046.2-201ENST00000618366 268 ntBASIC5.91□□□□□ -1.46
DDX1Q92499 AC073348.1-201ENST00000623002 331 ntBASIC5.91□□□□□ -1.46
DDX1Q92499 AC116563.2-201ENST00000624751 535 ntBASIC5.91□□□□□ -1.46
DDX1Q92499 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.91□□□□□ -1.46
DDX1Q92499 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
DDX1Q92499 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
DDX1Q92499 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
DDX1Q92499 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
DDX1Q92499 AC097461.1-201ENST00000568928 2821 ntBASIC5.91□□□□□ -1.46
DDX1Q92499 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
DDX1Q92499 TRIM51GP-201ENST00000534741 1350 ntBASIC5.91□□□□□ -1.46
DDX1Q92499 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
DDX1Q92499 LINC02019-201ENST00000608605 2060 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
DDX1Q92499 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
DDX1Q92499 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
DDX1Q92499 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.9□□□□□ -1.46
DDX1Q92499 AL353743.4-201ENST00000422653 1547 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.46
DDX1Q92499 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.9□□□□□ -1.46
DDX1Q92499 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.9□□□□□ -1.46
DDX1Q92499 AC009313.2-201ENST00000417893 1941 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
DDX1Q92499 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
DDX1Q92499 AC092079.1-201ENST00000558620 1985 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
DDX1Q92499 AC092162.3-201ENST00000624511 1624 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
DDX1Q92499 RNU4-21P-201ENST00000362802 126 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 RNU6-492P-201ENST00000363035 104 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 RNU5D-1-201ENST00000363299 116 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 RNU6-253P-201ENST00000384730 105 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 AL645733.1-201ENST00000402250 217 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 AL512430.2-201ENST00000406786 339 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 RN7SKP213-201ENST00000410746 298 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.9□□□□□ -1.46
DDX1Q92499 AC007899.1-201ENST00000412776 775 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 TPT1P2-201ENST00000413105 503 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.9□□□□□ -1.46
DDX1Q92499 AC091862.1-201ENST00000438016 1100 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 CEACAMP7-201ENST00000444105 496 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 AC003071.1-201ENST00000451219 789 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 VDAC2P4-201ENST00000452925 711 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 CBX1P2-201ENST00000453841 458 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.9□□□□□ -1.46
DDX1Q92499 RN7SL172P-201ENST00000460535 303 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 RN7SL188P-201ENST00000469842 285 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.9□□□□□ -1.46
DDX1Q92499 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.9□□□□□ -1.46
DDX1Q92499 MTATP6P22-201ENST00000507369 598 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.9□□□□□ -1.46
DDX1Q92499 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.9□□□□□ -1.46
DDX1Q92499 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.9□□□□□ -1.46
DDX1Q92499 RNU6-885P-201ENST00000516607 104 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 RN7SKP66-201ENST00000516681 231 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.9□□□□□ -1.46
DDX1Q92499 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.9□□□□□ -1.46
DDX1Q92499 AL121579.1-201ENST00000555129 305 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.9□□□□□ -1.46
DDX1Q92499 H3F3BP2-201ENST00000583907 357 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.9□□□□□ -1.46
DDX1Q92499 FKBP1AP1-201ENST00000594588 318 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 AC009027.1-201ENST00000604510 479 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.9□□□□□ -1.46
DDX1Q92499 AL158211.4-201ENST00000606988 584 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 AL355816.1-201ENST00000607951 118 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.9□□□□□ -1.46
DDX1Q92499 AC010678.1-201ENST00000614118 713 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 AL136981.2-201ENST00000617319 734 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 RNA5SP439-201ENST00000617595 124 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 CR392039.4-201ENST00000624968 501 ntBASIC5.9□□□□□ -1.46
DDX1Q92499 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
DDX1Q92499 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
DDX1Q92499 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
DDX1Q92499 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
DDX1Q92499 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DDX1Q92499 AC011447.7-201ENST00000624228 1590 ntBASIC5.89□□□□□ -1.47
DDX1Q92499 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
DDX1Q92499 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.89□□□□□ -1.47
DDX1Q92499 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DDX1Q92499 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.89□□□□□ -1.47
DDX1Q92499 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.89□□□□□ -1.47
DDX1Q92499 AC134882.1-201ENST00000603738 1676 ntBASIC5.89□□□□□ -1.47
DDX1Q92499 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DDX1Q92499 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DDX1Q92499 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.89□□□□□ -1.47
DDX1Q92499 AC020633.1-201ENST00000468439 2247 ntBASIC5.89□□□□□ -1.47
DDX1Q92499 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.89□□□□□ -1.47
DDX1Q92499 RNU6-582P-201ENST00000362989 107 ntBASIC5.89□□□□□ -1.47
DDX1Q92499 RNU4-76P-201ENST00000364509 141 ntBASIC5.89□□□□□ -1.47
DDX1Q92499 RNU6-621P-201ENST00000364752 109 ntBASIC5.89□□□□□ -1.47
DDX1Q92499 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
DDX1Q92499 RPL23AP47-201ENST00000408017 460 ntBASIC5.89□□□□□ -1.47
DDX1Q92499 RNU2-66P-201ENST00000410650 161 ntBASIC5.89□□□□□ -1.47
DDX1Q92499 RNU6-920P-201ENST00000410926 92 ntBASIC5.89□□□□□ -1.47
DDX1Q92499 RN7SKP142-201ENST00000411236 328 ntBASIC5.89□□□□□ -1.47
DDX1Q92499 FNDC3CP-201ENST00000420795 1155 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms