Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC004223.4-201ENST00000612426 332 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 AF246928.1-201ENST00000623768 87 ntBASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
ATG4AQ8WYN0 DDX18P4-201ENST00000511690 1966 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC107068.1-201ENST00000563286 4218 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC008758.3-201ENST00000507003 1829 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 IL6STP1-201ENST00000346911 1020 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 SNORD65.1-201ENST00000390889 71 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AL512422.1-201ENST00000407033 553 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 TIMM9P2-201ENST00000419324 266 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AL589823.1-201ENST00000429577 183 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 RPL21P110-201ENST00000433345 446 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 KCTD10P1-201ENST00000434203 625 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 USP9YP28-201ENST00000435142 589 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 RPL5P24-201ENST00000463742 885 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 RN7SL222P-201ENST00000476452 299 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 VPS26AP1-201ENST00000483197 979 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 RN7SL101P-201ENST00000496350 279 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 DYNLL1P6-201ENST00000503440 264 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 MTCYBP37-201ENST00000510642 1133 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 HMGB1P23-201ENST00000518743 568 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC005832.3-201ENST00000537929 631 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC103987.3-201ENST00000582071 292 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 MIR4691-201ENST00000583764 85 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC011445.2-201ENST00000599274 173 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC119751.7-201ENST00000600494 245 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AL031985.2-201ENST00000600955 480 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC006539.2-201ENST00000601729 572 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 IMMP1LP1-201ENST00000605170 488 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC013562.2-201ENST00000611632 603 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC009163.6-201ENST00000612367 342 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 AC005539.1-201ENST00000443768 1479 ntBASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4AQ8WYN0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 MTND4P5-201ENST00000435821 1374 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AL034370.1-201ENST00000397254 1590 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms