Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 STMN1P2-201ENST00000508435 439 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 AC022695.1-201ENST00000522089 237 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 OR8I1P-201ENST00000529291 931 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 SLC25A36P1-201ENST00000590111 465 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 BDP1P-201ENST00000582658 1990 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 CDY3P-201ENST00000454543 1618 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 RNU6-249P-201ENST00000363016 102 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 SNORD17-201ENST00000390930 237 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 MTND2P11-201ENST00000423638 648 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 RNF19BPX-201ENST00000426224 625 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 NPM1P25-201ENST00000429734 854 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 HMGB3P9-201ENST00000441799 583 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 SEPT14P1-201ENST00000458703 648 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 IGLV3-26-201ENST00000520756 302 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 AC116158.1-201ENST00000560231 2129 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 AL353684.1-201ENST00000622677 1120 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 AL353743.1-202ENST00000431724 1695 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 OR2X1P-201ENST00000421144 687 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 MIR5680-201ENST00000577577 84 ntBASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC2.61□□□□□ -1.99
ALMS1Q8TCU4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 GNRHR2P1-201ENST00000555315 631 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AC005086.4-201ENST00000623065 213 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AL139095.1-201ENST00000404326 391 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 RPL7P44-201ENST00000424827 742 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 RPL7P23-201ENST00000493874 747 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 RPS26P24-201ENST00000497656 331 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AC019278.1-201ENST00000623516 479 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 SNORA48.5-201ENST00000391143 135 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AL590609.2-201ENST00000421430 368 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 Z75741.1-201ENST00000446793 314 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AC010285.3-201ENST00000511668 676 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 RNA5SP208-201ENST00000516156 78 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 RPL23AP87-202ENST00000573039 466 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 OR56B2P-201ENST00000317102 954 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AJ239321.1-201ENST00000424255 564 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 MTCO1P45-201ENST00000431457 267 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 ATP5JP1-201ENST00000431631 322 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 RN7SL809P-201ENST00000482040 297 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AC004944.1-201ENST00000517807 3059 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AC022968.1-201ENST00000567372 442 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 AL391497.1-201ENST00000608671 547 ntBASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ALMS1Q8TCU4 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms