Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTL9Q8NET4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RTL9Q8NET4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTL9Q8NET4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 OR51C1P-202ENST00000641159 1444 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTL9Q8NET4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTL9Q8NET4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 RNA5SP52-201ENST00000362448 134 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 MIR491-201ENST00000384877 84 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 RANP8-201ENST00000444720 713 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 AC069240.1-201ENST00000548774 375 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 AC084759.1-201ENST00000561168 290 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.78□□□□□ -1.64
RTL9Q8NET4 AL391497.1-201ENST00000608671 547 ntBASIC4.78□□□□□ -1.64
RTL9Q8NET4 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTL9Q8NET4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTL9Q8NET4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTL9Q8NET4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTL9Q8NET4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.77□□□□□ -1.65
RTL9Q8NET4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTL9Q8NET4 AC097504.1-201ENST00000515103 2415 ntBASIC4.77□□□□□ -1.65
RTL9Q8NET4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RTL9Q8NET4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTL9Q8NET4 MIR34B-201ENST00000385076 84 ntBASIC4.77□□□□□ -1.65
RTL9Q8NET4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTL9Q8NET4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.77□□□□□ -1.65
RTL9Q8NET4 TRIM60P17-201ENST00000415181 719 ntBASIC4.77□□□□□ -1.65
RTL9Q8NET4 MTND2P15-201ENST00000418575 892 ntBASIC4.77□□□□□ -1.65
RTL9Q8NET4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.77□□□□□ -1.65
RTL9Q8NET4 snoU13.24-201ENST00000458998 104 ntBASIC4.77□□□□□ -1.65
RTL9Q8NET4 RPL31P61-201ENST00000496160 376 ntBASIC4.77□□□□□ -1.65
RTL9Q8NET4 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.77□□□□□ -1.65
RTL9Q8NET4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.77□□□□□ -1.65
RTL9Q8NET4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.77□□□□□ -1.65
RTL9Q8NET4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.77□□□□□ -1.65
RTL9Q8NET4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.77□□□□□ -1.65
RTL9Q8NET4 AC068020.1-201ENST00000594215 661 ntBASIC4.77□□□□□ -1.65
RTL9Q8NET4 AC016957.2-201ENST00000616998 848 ntBASIC4.77□□□□□ -1.65
RTL9Q8NET4 AL049781.1-201ENST00000623195 3585 ntBASIC4.77□□□□□ -1.65
RTL9Q8NET4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTL9Q8NET4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTL9Q8NET4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTL9Q8NET4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTL9Q8NET4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTL9Q8NET4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTL9Q8NET4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTL9Q8NET4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTL9Q8NET4 AC073587.1-201ENST00000447093 876 ntBASIC4.76□□□□□ -1.65
RTL9Q8NET4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 AC007967.1-201ENST00000455422 1159 ntBASIC4.76□□□□□ -1.65
RTL9Q8NET4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 AC104619.4-201ENST00000510773 249 ntBASIC4.76□□□□□ -1.65
RTL9Q8NET4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 AC244505.7-201ENST00000599675 272 ntBASIC4.76□□□□□ -1.65
RTL9Q8NET4 AC124856.1-201ENST00000600819 896 ntBASIC4.76□□□□□ -1.65
RTL9Q8NET4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
RTL9Q8NET4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTL9Q8NET4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTL9Q8NET4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTL9Q8NET4 CDC27P2-201ENST00000425026 1922 ntBASIC4.75□□□□□ -1.65
RTL9Q8NET4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.75□□□□□ -1.65
RTL9Q8NET4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTL9Q8NET4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
RTL9Q8NET4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.75□□□□□ -1.65
RTL9Q8NET4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTL9Q8NET4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.75□□□□□ -1.65
RTL9Q8NET4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.75□□□□□ -1.65
RTL9Q8NET4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTL9Q8NET4 RPS24P12-201ENST00000402084 394 ntBASIC4.75□□□□□ -1.65
RTL9Q8NET4 UBDP1-202ENST00000457888 382 ntBASIC4.75□□□□□ -1.65
RTL9Q8NET4 HMGN1P15-201ENST00000513870 295 ntBASIC4.75□□□□□ -1.65
RTL9Q8NET4 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.75□□□□□ -1.65
RTL9Q8NET4 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms