Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 MRPS36P5-201ENST00000551909 298 ntBASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 MRPS35P3-201ENST00000603189 709 ntBASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 AL390816.3-201ENST00000604527 1066 ntBASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 AC092954.1-201ENST00000609121 445 ntBASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 AC004908.3-201ENST00000610248 625 ntBASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 AP000255.1-201ENST00000610276 676 ntBASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 AP003072.4-201ENST00000624580 310 ntBASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 MTND2P41-201ENST00000637599 773 ntBASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 AL022393.1-201ENST00000625142 1677 ntBASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC33Q8N5R6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC104260.2-201ENST00000623551 3497 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 RNU6-560P-201ENST00000364007 108 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 SNORA70.10-201ENST00000384515 134 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 OR6C64P-201ENST00000419708 825 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 RPL7P44-201ENST00000424827 742 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 FGF7P5-201ENST00000441829 291 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC004865.1-201ENST00000442276 1003 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 RAB11AP1-201ENST00000442978 646 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC112498.1-201ENST00000444401 332 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 COX6CP18-201ENST00000448769 222 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 RN7SL459P-201ENST00000481078 302 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC104971.1-201ENST00000495117 578 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 MTCYBP16-201ENST00000509187 1129 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 COX6B1P5-201ENST00000509843 249 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC145350.1-201ENST00000567426 208 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 DPRXP4-201ENST00000578053 568 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 MEMO1P5-201ENST00000604810 406 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AP003392.5-201ENST00000607857 415 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 TUSC7.1-201ENST00000610969 165 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC105227.2-201ENST00000615075 605 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC124312.6-202ENST00000623624 418 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC068057.2-201ENST00000624047 895 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AP000648.2-201ENST00000624182 404 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AP001642.1-201ENST00000624727 2117 ntBASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC33Q8N5R6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC33Q8N5R6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
CCDC33Q8N5R6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC33Q8N5R6 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC33Q8N5R6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
CCDC33Q8N5R6 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms