Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS13CQ709C8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS13CQ709C8 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS13CQ709C8 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS13CQ709C8 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS13CQ709C8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS13CQ709C8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS13CQ709C8 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 PTGES3P3-201ENST00000511479 482 ntBASIC2.97□□□□□ -1.93
VPS13CQ709C8 AC104581.5-201ENST00000624171 7141 ntBASIC2.97□□□□□ -1.93
VPS13CQ709C8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VPS13CQ709C8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 VDAC2P1-201ENST00000399358 958 ntBASIC2.97□□□□□ -1.93
VPS13CQ709C8 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 AC113192.3-201ENST00000529152 742 ntBASIC2.97□□□□□ -1.93
VPS13CQ709C8 AC007066.2-202ENST00000566531 914 ntBASIC2.97□□□□□ -1.93
VPS13CQ709C8 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS13CQ709C8 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS13CQ709C8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS13CQ709C8 GVINP1-202ENST00000531871 7271 ntBASIC2.97□□□□□ -1.93
VPS13CQ709C8 HSPD1P11-201ENST00000508643 1702 ntBASIC2.97□□□□□ -1.93
VPS13CQ709C8 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VPS13CQ709C8 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 AC239868.2-201ENST00000564237 4527 ntBASIC2.97□□□□□ -1.93
VPS13CQ709C8 AC007496.3-201ENST00000624987 3443 ntBASIC2.97□□□□□ -1.93
VPS13CQ709C8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS13CQ709C8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS13CQ709C8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS13CQ709C8 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 SNORD9-201ENST00000362566 104 ntBASIC2.97□□□□□ -1.93
VPS13CQ709C8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS13CQ709C8 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS13CQ709C8 AC108938.1-201ENST00000451204 136 ntBASIC2.97□□□□□ -1.93
VPS13CQ709C8 AL591473.1-201ENST00000464297 313 ntBASIC2.97□□□□□ -1.93
VPS13CQ709C8 PCA3_2.1-201ENST00000612507 409 ntBASIC2.97□□□□□ -1.93
VPS13CQ709C8 AC007998.5-201ENST00000622938 237 ntBASIC2.97□□□□□ -1.93
VPS13CQ709C8 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
VPS13CQ709C8 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
VPS13CQ709C8 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS13CQ709C8 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13CQ709C8 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13CQ709C8 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13CQ709C8 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS13CQ709C8 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS13CQ709C8 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS13CQ709C8 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS13CQ709C8 AL451007.1-201ENST00000595491 289 ntBASIC2.96□□□□□ -1.94
VPS13CQ709C8 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13CQ709C8 SMG1P4-204ENST00000523028 4131 ntBASIC2.96□□□□□ -1.94
VPS13CQ709C8 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS13CQ709C8 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13CQ709C8 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13CQ709C8 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13CQ709C8 AC006504.1-201ENST00000562493 3666 ntBASIC2.96□□□□□ -1.94
VPS13CQ709C8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
VPS13CQ709C8 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS13CQ709C8 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13CQ709C8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
VPS13CQ709C8 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.96□□□□□ -1.94
VPS13CQ709C8 PRELID3BP10-201ENST00000431957 584 ntBASIC2.96□□□□□ -1.94
VPS13CQ709C8 RNU2-27P-201ENST00000516185 142 ntBASIC2.96□□□□□ -1.94
VPS13CQ709C8 AC069240.1-201ENST00000548774 375 ntBASIC2.96□□□□□ -1.94
VPS13CQ709C8 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS13CQ709C8 MIR4769-201ENST00000584126 77 ntBASIC2.96□□□□□ -1.94
VPS13CQ709C8 AC015922.4-201ENST00000612568 690 ntBASIC2.96□□□□□ -1.94
VPS13CQ709C8 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13CQ709C8 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC2.96□□□□□ -1.94
VPS13CQ709C8 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13CQ709C8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13CQ709C8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13CQ709C8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS13CQ709C8 RNA5SP424-201ENST00000390988 115 ntBASIC2.96□□□□□ -1.94
VPS13CQ709C8 DEFB109A-201ENST00000482450 265 ntBASIC2.96□□□□□ -1.94
VPS13CQ709C8 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS13CQ709C8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.96□□□□□ -1.94
VPS13CQ709C8 AC015802.5-201ENST00000607478 399 ntBASIC2.96□□□□□ -1.94
VPS13CQ709C8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13CQ709C8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13CQ709C8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13CQ709C8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13CQ709C8 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 HYDIN2-203ENST00000614586 13885 ntBASIC2.95□□□□□ -1.94
VPS13CQ709C8 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS13CQ709C8 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 AC234772.1-201ENST00000377927 937 ntBASIC2.95□□□□□ -1.94
VPS13CQ709C8 OR51A6P-201ENST00000418680 1004 ntBASIC2.95□□□□□ -1.94
VPS13CQ709C8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS13CQ709C8 AC011742.1-201ENST00000431448 434 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms