Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 HSFY5P-201ENST00000453726 309 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SIX1Q15475 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.21□□□□□ -1.74
SIX1Q15475 IGKV2D-10-201ENST00000520194 281 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 AC034205.1-201ENST00000520621 638 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
SIX1Q15475 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.21□□□□□ -1.74
SIX1Q15475 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX1Q15475 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX1Q15475 MTND5P21-201ENST00000531961 522 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 AC009643.1-201ENST00000532030 391 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.21□□□□□ -1.74
SIX1Q15475 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX1Q15475 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.21□□□□□ -1.74
SIX1Q15475 AL358913.1-201ENST00000554342 121 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 GNRHR2P1-201ENST00000555315 631 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 AC084759.1-201ENST00000561168 290 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 MIR5684-201ENST00000585074 65 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 AC005191.1-201ENST00000603950 358 ntBASIC4.21□□□□□ -1.74
SIX1Q15475 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.21□□□□□ -1.74
SIX1Q15475 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX1Q15475 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SIX1Q15475 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SIX1Q15475 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SIX1Q15475 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SIX1Q15475 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SIX1Q15475 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.2□□□□□ -1.74
SIX1Q15475 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.2□□□□□ -1.74
SIX1Q15475 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.2□□□□□ -1.74
SIX1Q15475 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SIX1Q15475 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SIX1Q15475 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.2□□□□□ -1.74
SIX1Q15475 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.2□□□□□ -1.74
SIX1Q15475 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.2□□□□□ -1.74
SIX1Q15475 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SIX1Q15475 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIX1Q15475 RNA5SP322-201ENST00000363617 119 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIX1Q15475 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SIX1Q15475 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIX1Q15475 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SIX1Q15475 MT-TP-201ENST00000387461 68 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 TAF9BP2-201ENST00000400856 499 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 ATP5F1P6-201ENST00000402768 767 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.2□□□□□ -1.74
SIX1Q15475 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX1Q15475 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.2□□□□□ -1.74
SIX1Q15475 AC092017.2-201ENST00000427600 362 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 BTF3P10-201ENST00000433415 495 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 PTP4A1P3-201ENST00000433661 420 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.2□□□□□ -1.74
SIX1Q15475 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SIX1Q15475 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX1Q15475 RPL23AP46-201ENST00000438548 490 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.2□□□□□ -1.74
SIX1Q15475 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.2□□□□□ -1.74
SIX1Q15475 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.2□□□□□ -1.74
SIX1Q15475 RPL23AP23-201ENST00000452590 471 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 AC069499.1-201ENST00000489433 509 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 MTCYBP19-201ENST00000517463 1124 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.2□□□□□ -1.74
SIX1Q15475 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.2□□□□□ -1.74
SIX1Q15475 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX1Q15475 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
SIX1Q15475 AC087888.1-201ENST00000550884 1254 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SIX1Q15475 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.2□□□□□ -1.74
SIX1Q15475 AC023158.1-201ENST00000561632 1025 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX1Q15475 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
SIX1Q15475 AP003392.5-201ENST00000607857 415 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 AL731566.2-201ENST00000618971 317 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 AC006840.1-201ENST00000623069 542 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 AL359715.5-201ENST00000623431 443 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 FRG1DP-201ENST00000635586 771 ntBASIC4.2□□□□□ -1.74
SIX1Q15475 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
SIX1Q15475 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIX1Q15475 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SIX1Q15475 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIX1Q15475 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
SIX1Q15475 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SIX1Q15475 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.2□□□□□ -1.74
SIX1Q15475 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIX1Q15475 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SIX1Q15475 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIX1Q15475 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIX1Q15475 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.19□□□□□ -1.74
SIX1Q15475 GCNT6-201ENST00000379591 934 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.19□□□□□ -1.74
SIX1Q15475 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.19□□□□□ -1.74
SIX1Q15475 RPL18P10-201ENST00000425606 538 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 NPM1P34-201ENST00000428821 893 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.19□□□□□ -1.74
SIX1Q15475 COX6B1P7-201ENST00000430845 235 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.19□□□□□ -1.74
SIX1Q15475 AC087650.1-201ENST00000431445 468 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 HMGB3P10-201ENST00000434734 572 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.19□□□□□ -1.74
SIX1Q15475 CBX1P1-201ENST00000440184 427 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 ARAFP2-201ENST00000440565 559 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms