Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK3Q00526 AP001160.4-201ENST00000596971 382 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 BPIFA4P-203ENST00000603168 689 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 AC023509.5-201ENST00000617434 807 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 MIR6810-201ENST00000622701 70 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 AC006065.6-201ENST00000625201 545 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 AL121594.5-201ENST00000631724 573 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 AL353743.4-201ENST00000422653 1547 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDK3Q00526 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDK3Q00526 AC107027.3-201ENST00000565095 3473 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK3Q00526 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK3Q00526 AL672167.1-205ENST00000641112 3080 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK3Q00526 RNU5E-10P-201ENST00000363506 118 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 SNORA72.3-201ENST00000365074 132 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 UBBP2-201ENST00000376781 231 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 RNU2-6P-201ENST00000411404 190 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 VN1R51P-201ENST00000411675 945 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK3Q00526 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK3Q00526 AL590609.2-201ENST00000421430 368 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK3Q00526 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK3Q00526 RPS26P2-201ENST00000440331 348 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 AC002542.1-201ENST00000440683 193 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 AL592437.1-201ENST00000443781 492 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK3Q00526 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK3Q00526 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDK3Q00526 CYCSP34-201ENST00000458172 304 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 RPL23AP24-201ENST00000458203 385 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.44□□□□□ -1.7
CDK3Q00526 AC104164.3-201ENST00000467363 1258 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 AC011276.1-201ENST00000469688 323 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDK3Q00526 NIP7P2-201ENST00000485801 544 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
CDK3Q00526 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.44□□□□□ -1.7
CDK3Q00526 AC023050.1-201ENST00000498198 304 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.44□□□□□ -1.7
CDK3Q00526 HPRT1P2-201ENST00000505250 544 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 RN7SKP283-201ENST00000517197 270 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 OR8G5-201ENST00000524943 1041 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 AC139103.1-201ENST00000534696 1030 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.44□□□□□ -1.7
CDK3Q00526 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 AC090312.2-201ENST00000582687 378 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 AC091178.1-203ENST00000584586 279 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.44□□□□□ -1.7
CDK3Q00526 AL391001.1-201ENST00000602747 715 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 NTAN1P1-201ENST00000603150 646 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 AC096947.1-201ENST00000603233 470 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.44□□□□□ -1.7
CDK3Q00526 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK3Q00526 MIR6758-201ENST00000620653 63 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CDK3Q00526 AC092608.3-201ENST00000625017 386 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.44□□□□□ -1.7
CDK3Q00526 CDRT1-208ENST00000630868 794 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 OR4G3P-201ENST00000633500 913 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.44□□□□□ -1.7
CDK3Q00526 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.44□□□□□ -1.7
CDK3Q00526 AC006971.1-201ENST00000407916 4486 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CDK3Q00526 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CDK3Q00526 MFSD8-242ENST00000641690 4199 ntBASIC4.44□□□□□ -1.7
CDK3Q00526 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK3Q00526 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK3Q00526 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CDK3Q00526 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK3Q00526 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDK3Q00526 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK3Q00526 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK3Q00526 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK3Q00526 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK3Q00526 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDK3Q00526 MTCO1P6-201ENST00000481192 1384 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CDK3Q00526 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK3Q00526 AC139769.1-204ENST00000472297 1931 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 AC009229.4-201ENST00000623854 1947 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 RNU6-353P-201ENST00000364266 108 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 RNA5SP509-201ENST00000364577 119 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 RNU6-178P-201ENST00000384631 104 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CDK3Q00526 RNU4-25P-201ENST00000410569 230 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK3Q00526 P2RY10P2-201ENST00000416730 913 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 OR5AW1P-201ENST00000426334 1006 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 AC073143.1-201ENST00000436316 395 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 UBE2V1P5-201ENST00000440070 405 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 AC092809.1-201ENST00000441469 474 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 AL031584.1-201ENST00000447169 754 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK3Q00526 AC012671.1-201ENST00000451912 203 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 AC053481.1-201ENST00000467217 306 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 AC092905.1-201ENST00000467527 949 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms