Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CYP1D1P-201ENST00000416662 1433 ntBASIC5.61□□□□□ -1.51
YBX1P67809 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.61□□□□□ -1.51
YBX1P67809 AL035660.1-201ENST00000422041 222 ntBASIC5.61□□□□□ -1.51
YBX1P67809 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.61□□□□□ -1.51
YBX1P67809 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
YBX1P67809 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.61□□□□□ -1.51
YBX1P67809 AC099670.2-201ENST00000435130 321 ntBASIC5.61□□□□□ -1.51
YBX1P67809 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.61□□□□□ -1.51
YBX1P67809 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.61□□□□□ -1.51
YBX1P67809 NXT1P1-201ENST00000458481 316 ntBASIC5.61□□□□□ -1.51
YBX1P67809 AC011476.1-201ENST00000466725 307 ntBASIC5.61□□□□□ -1.51
YBX1P67809 AC111193.1-201ENST00000504097 155 ntBASIC5.61□□□□□ -1.51
YBX1P67809 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.61□□□□□ -1.51
YBX1P67809 AC022447.3-201ENST00000506865 495 ntBASIC5.61□□□□□ -1.51
YBX1P67809 AC107982.1-201ENST00000507171 1300 ntBASIC5.61□□□□□ -1.51
YBX1P67809 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.61□□□□□ -1.51
YBX1P67809 AF235103.2-201ENST00000525753 346 ntBASIC5.61□□□□□ -1.51
YBX1P67809 AC015689.2-201ENST00000528172 1738 ntBASIC5.61□□□□□ -1.51
YBX1P67809 AP000648.1-201ENST00000529682 397 ntBASIC5.61□□□□□ -1.51
YBX1P67809 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.61□□□□□ -1.51
YBX1P67809 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
YBX1P67809 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
YBX1P67809 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.61□□□□□ -1.51
YBX1P67809 AC090022.1-201ENST00000546569 311 ntBASIC5.61□□□□□ -1.51
YBX1P67809 AL157687.1-201ENST00000554853 619 ntBASIC5.61□□□□□ -1.51
YBX1P67809 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.61□□□□□ -1.51
YBX1P67809 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.61□□□□□ -1.51
YBX1P67809 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.61□□□□□ -1.51
YBX1P67809 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.61□□□□□ -1.51
YBX1P67809 AC008521.2-201ENST00000591021 259 ntBASIC5.61□□□□□ -1.51
YBX1P67809 AC006115.2-201ENST00000596823 202 ntBASIC5.61□□□□□ -1.51
YBX1P67809 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.61□□□□□ -1.51
YBX1P67809 BNIP3P11-201ENST00000603878 563 ntBASIC5.61□□□□□ -1.51
YBX1P67809 FAM27E4-201ENST00000605259 342 ntBASIC5.61□□□□□ -1.51
YBX1P67809 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.61□□□□□ -1.51
YBX1P67809 AC090574.1-201ENST00000623186 233 ntBASIC5.61□□□□□ -1.51
YBX1P67809 AP000432.2-201ENST00000624164 2048 ntBASIC5.61□□□□□ -1.51
YBX1P67809 AC068880.5-201ENST00000624331 290 ntBASIC5.61□□□□□ -1.51
YBX1P67809 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
YBX1P67809 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
YBX1P67809 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.61□□□□□ -1.51
YBX1P67809 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.6□□□□□ -1.51
YBX1P67809 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
YBX1P67809 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
YBX1P67809 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.6□□□□□ -1.51
YBX1P67809 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.6□□□□□ -1.51
YBX1P67809 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
YBX1P67809 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
YBX1P67809 RNA5SP453-201ENST00000362503 119 ntBASIC5.6□□□□□ -1.51
YBX1P67809 RNU6-839P-201ENST00000363347 108 ntBASIC5.6□□□□□ -1.51
YBX1P67809 RNU6-1066P-201ENST00000363573 105 ntBASIC5.6□□□□□ -1.51
YBX1P67809 SNORA17A-201ENST00000391185 133 ntBASIC5.6□□□□□ -1.51
YBX1P67809 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.6□□□□□ -1.51
YBX1P67809 MIR1302-11-201ENST00000408051 138 ntBASIC5.6□□□□□ -1.51
YBX1P67809 MIR1302-9-201ENST00000408365 138 ntBASIC5.6□□□□□ -1.51
YBX1P67809 MIR1302-10-201ENST00000408734 138 ntBASIC5.6□□□□□ -1.51
YBX1P67809 Z93019.1-201ENST00000416450 973 ntBASIC5.6□□□□□ -1.51
YBX1P67809 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.6□□□□□ -1.51
YBX1P67809 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.6□□□□□ -1.51
YBX1P67809 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
YBX1P67809 AL513185.2-201ENST00000425543 193 ntBASIC5.6□□□□□ -1.51
YBX1P67809 USP9YP9-201ENST00000429406 715 ntBASIC5.6□□□□□ -1.51
YBX1P67809 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.6□□□□□ -1.51
YBX1P67809 BX248409.1-201ENST00000455497 255 ntBASIC5.6□□□□□ -1.51
YBX1P67809 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.6□□□□□ -1.51
YBX1P67809 PSMC1P13-201ENST00000458195 985 ntBASIC5.6□□□□□ -1.51
YBX1P67809 AC010307.1-201ENST00000467206 836 ntBASIC5.6□□□□□ -1.51
YBX1P67809 AC112206.1-201ENST00000468416 477 ntBASIC5.6□□□□□ -1.51
YBX1P67809 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
YBX1P67809 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.6□□□□□ -1.51
YBX1P67809 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.6□□□□□ -1.51
YBX1P67809 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.6□□□□□ -1.51
YBX1P67809 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.6□□□□□ -1.51
YBX1P67809 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.6□□□□□ -1.51
YBX1P67809 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.6□□□□□ -1.51
YBX1P67809 HMGN2P47-201ENST00000559378 272 ntBASIC5.6□□□□□ -1.51
YBX1P67809 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.6□□□□□ -1.51
YBX1P67809 MIR4637-201ENST00000582405 84 ntBASIC5.6□□□□□ -1.51
YBX1P67809 MIR4795-201ENST00000584182 89 ntBASIC5.6□□□□□ -1.51
YBX1P67809 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
YBX1P67809 AL162730.1-201ENST00000605734 292 ntBASIC5.6□□□□□ -1.51
YBX1P67809 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.6□□□□□ -1.51
YBX1P67809 MIR1302-2-201ENST00000607096 138 ntBASIC5.6□□□□□ -1.51
YBX1P67809 AL442067.2-201ENST00000614033 363 ntBASIC5.6□□□□□ -1.51
YBX1P67809 AL139099.4-201ENST00000614802 114 ntBASIC5.6□□□□□ -1.51
YBX1P67809 AC009233.1-201ENST00000616477 371 ntBASIC5.6□□□□□ -1.51
YBX1P67809 AC005899.7-201ENST00000618199 588 ntBASIC5.6□□□□□ -1.51
YBX1P67809 AP003400.3-201ENST00000624904 346 ntBASIC5.6□□□□□ -1.51
YBX1P67809 SNORA17.5-201ENST00000630429 132 ntBASIC5.6□□□□□ -1.51
YBX1P67809 MIR3662-201ENST00000637030 95 ntBASIC5.6□□□□□ -1.51
YBX1P67809 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
YBX1P67809 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
YBX1P67809 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
YBX1P67809 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
YBX1P67809 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.6□□□□□ -1.51
YBX1P67809 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
YBX1P67809 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.6□□□□□ -1.51
YBX1P67809 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
YBX1P67809 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.6□□□□□ -1.51
YBX1P67809 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms