Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.6□□□□□ -1.83
LSM6P62312 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.6□□□□□ -1.83
LSM6P62312 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.6□□□□□ -1.83
LSM6P62312 AC010680.4-201ENST00000605334 543 ntBASIC3.6□□□□□ -1.83
LSM6P62312 SNORA35B-201ENST00000607417 129 ntBASIC3.6□□□□□ -1.83
LSM6P62312 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.6□□□□□ -1.83
LSM6P62312 MIR7641-1-201ENST00000627518 61 ntBASIC3.6□□□□□ -1.83
LSM6P62312 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LSM6P62312 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LSM6P62312 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
LSM6P62312 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LSM6P62312 LARP1BP1-201ENST00000506036 1359 ntBASIC3.6□□□□□ -1.83
LSM6P62312 AC066616.2-201ENST00000559334 1481 ntBASIC3.6□□□□□ -1.83
LSM6P62312 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.6□□□□□ -1.83
LSM6P62312 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LSM6P62312 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.59□□□□□ -1.83
LSM6P62312 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LSM6P62312 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
LSM6P62312 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.83
LSM6P62312 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.59□□□□□ -1.83
LSM6P62312 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LSM6P62312 RNA5SP322-201ENST00000363617 119 ntBASIC3.59□□□□□ -1.83
LSM6P62312 MIR124-3-201ENST00000384866 87 ntBASIC3.59□□□□□ -1.83
LSM6P62312 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LSM6P62312 Z98941.1-201ENST00000407764 100 ntBASIC3.59□□□□□ -1.83
LSM6P62312 MIR1251-201ENST00000408552 70 ntBASIC3.59□□□□□ -1.83
LSM6P62312 RNA5SP306-201ENST00000411087 107 ntBASIC3.59□□□□□ -1.83
LSM6P62312 AL590806.1-201ENST00000415818 853 ntBASIC3.59□□□□□ -1.83
LSM6P62312 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.59□□□□□ -1.83
LSM6P62312 AC108032.1-201ENST00000416706 207 ntBASIC3.59□□□□□ -1.83
LSM6P62312 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.59□□□□□ -1.83
LSM6P62312 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.59□□□□□ -1.83
LSM6P62312 AC092832.1-201ENST00000422934 400 ntBASIC3.59□□□□□ -1.83
LSM6P62312 RPL23AP38-201ENST00000423801 469 ntBASIC3.59□□□□□ -1.83
LSM6P62312 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.59□□□□□ -1.83
LSM6P62312 AL358472.1-201ENST00000431295 329 ntBASIC3.59□□□□□ -1.83
LSM6P62312 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.59□□□□□ -1.83
LSM6P62312 TPTE2P3-201ENST00000441562 1189 ntBASIC3.59□□□□□ -1.83
LSM6P62312 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.59□□□□□ -1.83
LSM6P62312 MTND2P25-201ENST00000449028 610 ntBASIC3.59□□□□□ -1.83
LSM6P62312 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM6P62312 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM6P62312 AC005229.2-201ENST00000456995 399 ntBASIC3.59□□□□□ -1.83
LSM6P62312 AC092691.2-201ENST00000461787 803 ntBASIC3.59□□□□□ -1.83
LSM6P62312 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM6P62312 AC106806.2-201ENST00000509365 500 ntBASIC3.59□□□□□ -1.83
LSM6P62312 AC034205.1-201ENST00000520621 638 ntBASIC3.59□□□□□ -1.83
LSM6P62312 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM6P62312 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LSM6P62312 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.59□□□□□ -1.83
LSM6P62312 AC022968.1-201ENST00000567372 442 ntBASIC3.59□□□□□ -1.83
LSM6P62312 AC009101.1-201ENST00000568135 242 ntBASIC3.59□□□□□ -1.83
LSM6P62312 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM6P62312 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM6P62312 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.59□□□□□ -1.83
LSM6P62312 MIR5684-201ENST00000585074 65 ntBASIC3.59□□□□□ -1.83
LSM6P62312 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LSM6P62312 AC005255.1-201ENST00000593748 216 ntBASIC3.59□□□□□ -1.83
LSM6P62312 AC114878.2-201ENST00000604863 1251 ntBASIC3.59□□□□□ -1.83
LSM6P62312 AL451044.1-201ENST00000604867 238 ntBASIC3.59□□□□□ -1.83
LSM6P62312 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.59□□□□□ -1.83
LSM6P62312 AC128687.2-201ENST00000609657 566 ntBASIC3.59□□□□□ -1.83
LSM6P62312 MIR7151-201ENST00000617477 60 ntBASIC3.59□□□□□ -1.83
LSM6P62312 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LSM6P62312 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
LSM6P62312 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.59□□□□□ -1.84
LSM6P62312 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
LSM6P62312 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.59□□□□□ -1.84
LSM6P62312 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LSM6P62312 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
LSM6P62312 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.59□□□□□ -1.84
LSM6P62312 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LSM6P62312 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
LSM6P62312 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
LSM6P62312 Z82217.1-201ENST00000625157 8149 ntBASIC3.58□□□□□ -1.84
LSM6P62312 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.58□□□□□ -1.84
LSM6P62312 MAPK10-373ENST00000641983 6772 ntBASIC3.58□□□□□ -1.84
LSM6P62312 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.58□□□□□ -1.84
LSM6P62312 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.58□□□□□ -1.84
LSM6P62312 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LSM6P62312 MIR423-201ENST00000362201 94 ntBASIC3.58□□□□□ -1.84
LSM6P62312 SNORD35B-201ENST00000363660 87 ntBASIC3.58□□□□□ -1.84
LSM6P62312 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.58□□□□□ -1.84
LSM6P62312 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LSM6P62312 FAR2P2-201ENST00000413041 594 ntBASIC3.58□□□□□ -1.84
LSM6P62312 RPS12P23-201ENST00000419579 400 ntBASIC3.58□□□□□ -1.84
LSM6P62312 RPL18P10-201ENST00000425606 538 ntBASIC3.58□□□□□ -1.84
LSM6P62312 VDAC1P6-201ENST00000430062 855 ntBASIC3.58□□□□□ -1.84
LSM6P62312 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.58□□□□□ -1.84
LSM6P62312 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.58□□□□□ -1.84
LSM6P62312 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.58□□□□□ -1.84
LSM6P62312 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.58□□□□□ -1.84
LSM6P62312 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
LSM6P62312 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.58□□□□□ -1.84
LSM6P62312 AC105137.1-201ENST00000484355 562 ntBASIC3.58□□□□□ -1.84
LSM6P62312 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.58□□□□□ -1.84
LSM6P62312 IGBP1P5-201ENST00000507524 1000 ntBASIC3.58□□□□□ -1.84
LSM6P62312 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.58□□□□□ -1.84
LSM6P62312 NDUFB4P9-201ENST00000511646 388 ntBASIC3.58□□□□□ -1.84
LSM6P62312 RNU6-319P-201ENST00000516025 108 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms