Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 Y_RNA.169-201ENST00000363745 96 ntBASIC3.8□□□□□ -1.8
LMO4P61968 RNA5SP509-201ENST00000364577 119 ntBASIC3.8□□□□□ -1.8
LMO4P61968 SNORD116-1-201ENST00000384335 95 ntBASIC3.8□□□□□ -1.8
LMO4P61968 HMGB1P13-201ENST00000406019 642 ntBASIC3.8□□□□□ -1.8
LMO4P61968 RNU2-17P-201ENST00000410290 190 ntBASIC3.8□□□□□ -1.8
LMO4P61968 UBE2V1P11-201ENST00000411559 285 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.8□□□□□ -1.8
LMO4P61968 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.8□□□□□ -1.8
LMO4P61968 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.8□□□□□ -1.8
LMO4P61968 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.8□□□□□ -1.8
LMO4P61968 AC234779.1-201ENST00000425910 285 ntBASIC3.8□□□□□ -1.8
LMO4P61968 RSL24D1P6-201ENST00000426934 401 ntBASIC3.8□□□□□ -1.8
LMO4P61968 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.8□□□□□ -1.8
LMO4P61968 BX119904.1-201ENST00000432026 348 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.8□□□□□ -1.8
LMO4P61968 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LMO4P61968 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.8□□□□□ -1.8
LMO4P61968 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.8□□□□□ -1.8
LMO4P61968 THAP5P1-201ENST00000439089 262 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.8□□□□□ -1.8
LMO4P61968 ATP5C1P1-201ENST00000441945 895 ntBASIC3.8□□□□□ -1.8
LMO4P61968 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.8□□□□□ -1.8
LMO4P61968 ISCUP1-201ENST00000454451 448 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.8□□□□□ -1.8
LMO4P61968 RPL23AP24-201ENST00000458203 385 ntBASIC3.8□□□□□ -1.8
LMO4P61968 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
LMO4P61968 RPL21P126-201ENST00000470049 478 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.8□□□□□ -1.8
LMO4P61968 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LMO4P61968 AC005912.1-201ENST00000495392 255 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AC083829.1-201ENST00000503756 657 ntBASIC3.8□□□□□ -1.8
LMO4P61968 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.8□□□□□ -1.8
LMO4P61968 IGBP1P5-201ENST00000507524 1000 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.8□□□□□ -1.8
LMO4P61968 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LMO4P61968 AC015795.1-201ENST00000513669 327 ntBASIC3.8□□□□□ -1.8
LMO4P61968 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.8□□□□□ -1.8
LMO4P61968 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.8□□□□□ -1.8
LMO4P61968 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.8□□□□□ -1.8
LMO4P61968 AP003033.1-201ENST00000527244 415 ntBASIC3.8□□□□□ -1.8
LMO4P61968 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.8□□□□□ -1.8
LMO4P61968 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LMO4P61968 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.8□□□□□ -1.8
LMO4P61968 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.8□□□□□ -1.8
LMO4P61968 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
LMO4P61968 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.8□□□□□ -1.8
LMO4P61968 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.8□□□□□ -1.8
LMO4P61968 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.8□□□□□ -1.8
LMO4P61968 AC090948.1-201ENST00000607464 549 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.8□□□□□ -1.8
LMO4P61968 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.8□□□□□ -1.8
LMO4P61968 AC005962.2-201ENST00000611427 652 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AC009318.3-201ENST00000616916 503 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AC139769.3-201ENST00000618383 175 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AL121890.3-201ENST00000618494 516 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AC015804.1-201ENST00000622935 435 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AC104985.3-201ENST00000623479 597 ntBASIC3.8□□□□□ -1.8
LMO4P61968 AC017037.3-201ENST00000625016 472 ntBASIC3.8□□□□□ -1.8
LMO4P61968 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.8□□□□□ -1.8
LMO4P61968 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.8□□□□□ -1.8
LMO4P61968 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LMO4P61968 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LMO4P61968 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC3.8□□□□□ -1.8
LMO4P61968 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LMO4P61968 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LMO4P61968 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 AP005435.3-201ENST00000531260 3198 ntBASIC3.79□□□□□ -1.8
LMO4P61968 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LMO4P61968 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 MIR92A2-201ENST00000385299 75 ntBASIC3.79□□□□□ -1.8
LMO4P61968 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.79□□□□□ -1.8
LMO4P61968 AL049693.1-201ENST00000402760 611 ntBASIC3.79□□□□□ -1.8
LMO4P61968 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.79□□□□□ -1.8
LMO4P61968 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.79□□□□□ -1.8
LMO4P61968 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.79□□□□□ -1.8
LMO4P61968 CKS1BP6-201ENST00000424932 240 ntBASIC3.79□□□□□ -1.8
LMO4P61968 RPS26P47-201ENST00000427219 348 ntBASIC3.79□□□□□ -1.8
LMO4P61968 FO393419.3-201ENST00000428741 282 ntBASIC3.79□□□□□ -1.8
LMO4P61968 MTCO1P43-201ENST00000431831 488 ntBASIC3.79□□□□□ -1.8
LMO4P61968 AL035458.1-201ENST00000433096 585 ntBASIC3.79□□□□□ -1.8
LMO4P61968 AC096638.2-201ENST00000434965 711 ntBASIC3.79□□□□□ -1.8
LMO4P61968 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.79□□□□□ -1.8
LMO4P61968 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.79□□□□□ -1.8
LMO4P61968 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.79□□□□□ -1.8
LMO4P61968 RPL23AP93-201ENST00000440847 484 ntBASIC3.79□□□□□ -1.8
LMO4P61968 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
LMO4P61968 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.79□□□□□ -1.8
LMO4P61968 ZNF886P-201ENST00000450781 723 ntBASIC3.79□□□□□ -1.8
LMO4P61968 FTH1P2-201ENST00000466086 412 ntBASIC3.79□□□□□ -1.8
LMO4P61968 AC103987.1-201ENST00000473394 348 ntBASIC3.79□□□□□ -1.8
LMO4P61968 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.79□□□□□ -1.8
LMO4P61968 AC068587.1-201ENST00000483613 781 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms