Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC018644.1-201ENST00000429934 551 ntBASIC4.64□□□□□ -1.67
VCPP55072 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.64□□□□□ -1.67
VCPP55072 AC114878.1-201ENST00000441166 358 ntBASIC4.64□□□□□ -1.67
VCPP55072 RPL23AP43-201ENST00000446445 471 ntBASIC4.64□□□□□ -1.67
VCPP55072 AL162151.2-201ENST00000448875 158 ntBASIC4.64□□□□□ -1.67
VCPP55072 DDX39BP2-208ENST00000453923 258 ntBASIC4.64□□□□□ -1.67
VCPP55072 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.64□□□□□ -1.67
VCPP55072 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.64□□□□□ -1.67
VCPP55072 RPL5P13-201ENST00000462840 709 ntBASIC4.64□□□□□ -1.67
VCPP55072 RPS27AP17-201ENST00000463344 455 ntBASIC4.64□□□□□ -1.67
VCPP55072 VN1R105P-201ENST00000486595 910 ntBASIC4.64□□□□□ -1.67
VCPP55072 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.64□□□□□ -1.67
VCPP55072 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.64□□□□□ -1.67
VCPP55072 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
VCPP55072 IGLV3-26-201ENST00000520756 302 ntBASIC4.64□□□□□ -1.67
VCPP55072 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.64□□□□□ -1.67
VCPP55072 SMARCE1P4-201ENST00000523647 241 ntBASIC4.64□□□□□ -1.67
VCPP55072 TRAV8-5-201ENST00000537369 341 ntBASIC4.64□□□□□ -1.67
VCPP55072 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.64□□□□□ -1.67
VCPP55072 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.64□□□□□ -1.67
VCPP55072 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.64□□□□□ -1.67
VCPP55072 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.64□□□□□ -1.67
VCPP55072 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.64□□□□□ -1.67
VCPP55072 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.64□□□□□ -1.67
VCPP55072 AP001160.4-201ENST00000596971 382 ntBASIC4.64□□□□□ -1.67
VCPP55072 CR392039.5-201ENST00000623201 510 ntBASIC4.64□□□□□ -1.67
VCPP55072 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.64□□□□□ -1.67
VCPP55072 MIR6715B-201ENST00000637172 77 ntBASIC4.64□□□□□ -1.67
VCPP55072 AC119674.1-220ENST00000641502 1048 ntBASIC4.64□□□□□ -1.67
VCPP55072 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.64□□□□□ -1.67
VCPP55072 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
VCPP55072 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
VCPP55072 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VCPP55072 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.64□□□□□ -1.67
VCPP55072 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
VCPP55072 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
VCPP55072 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VCPP55072 LARP1BP1-201ENST00000506036 1359 ntBASIC4.64□□□□□ -1.67
VCPP55072 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
VCPP55072 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VCPP55072 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VCPP55072 SPATA2P1-201ENST00000431223 2055 ntBASIC4.63□□□□□ -1.67
VCPP55072 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
VCPP55072 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VCPP55072 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VCPP55072 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
VCPP55072 AC008033.1-201ENST00000216407 1162 ntBASIC4.63□□□□□ -1.67
VCPP55072 RNA5SP307-201ENST00000362863 116 ntBASIC4.63□□□□□ -1.67
VCPP55072 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VCPP55072 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VCPP55072 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VCPP55072 LAP3P1-201ENST00000403648 294 ntBASIC4.63□□□□□ -1.67
VCPP55072 SNORA74C-2-201ENST00000411179 201 ntBASIC4.63□□□□□ -1.67
VCPP55072 EIF4EP1-201ENST00000422311 642 ntBASIC4.63□□□□□ -1.67
VCPP55072 RPS12P5-201ENST00000423449 371 ntBASIC4.63□□□□□ -1.67
VCPP55072 AL445584.1-201ENST00000431451 330 ntBASIC4.63□□□□□ -1.67
VCPP55072 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.63□□□□□ -1.67
VCPP55072 ARL5AP3-201ENST00000439327 386 ntBASIC4.63□□□□□ -1.67
VCPP55072 SNORA59A-201ENST00000459326 152 ntBASIC4.63□□□□□ -1.67
VCPP55072 AC005912.1-201ENST00000495392 255 ntBASIC4.63□□□□□ -1.67
VCPP55072 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VCPP55072 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.63□□□□□ -1.67
VCPP55072 DEFB109D-201ENST00000529497 240 ntBASIC4.63□□□□□ -1.67
VCPP55072 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.63□□□□□ -1.67
VCPP55072 RPL23AP97-201ENST00000568955 471 ntBASIC4.63□□□□□ -1.67
VCPP55072 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.63□□□□□ -1.67
VCPP55072 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VCPP55072 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.63□□□□□ -1.67
VCPP55072 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.63□□□□□ -1.67
VCPP55072 KATNBL1P1-201ENST00000605192 748 ntBASIC4.63□□□□□ -1.67
VCPP55072 AC073111.2-201ENST00000605657 1075 ntBASIC4.63□□□□□ -1.67
VCPP55072 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.63□□□□□ -1.67
VCPP55072 AL138721.1-201ENST00000616756 179 ntBASIC4.63□□□□□ -1.67
VCPP55072 AC007546.1-201ENST00000619452 559 ntBASIC4.63□□□□□ -1.67
VCPP55072 AC007546.2-201ENST00000623996 360 ntBASIC4.63□□□□□ -1.67
VCPP55072 AL118508.4-201ENST00000624142 1176 ntBASIC4.63□□□□□ -1.67
VCPP55072 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.63□□□□□ -1.67
VCPP55072 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VCPP55072 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.63□□□□□ -1.67
VCPP55072 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VCPP55072 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
VCPP55072 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VCPP55072 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.63□□□□□ -1.67
VCPP55072 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VCPP55072 AL592437.2-201ENST00000421655 2434 ntBASIC4.63□□□□□ -1.67
VCPP55072 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VCPP55072 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
VCPP55072 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
VCPP55072 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VCPP55072 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.62□□□□□ -1.67
VCPP55072 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VCPP55072 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VCPP55072 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
VCPP55072 AC067945.1-201ENST00000342609 618 ntBASIC4.62□□□□□ -1.67
VCPP55072 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VCPP55072 RNU1-108P-201ENST00000362556 161 ntBASIC4.62□□□□□ -1.67
VCPP55072 RNU6-1279P-201ENST00000383917 103 ntBASIC4.62□□□□□ -1.67
VCPP55072 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.62□□□□□ -1.67
VCPP55072 VN1R8P-201ENST00000407739 893 ntBASIC4.62□□□□□ -1.67
VCPP55072 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms