Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HMGCS2P54868 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HMGCS2P54868 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS2P54868 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HMGCS2P54868 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HMGCS2P54868 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS2P54868 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS2P54868 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS2P54868 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCS2P54868 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS2P54868 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGCS2P54868 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.58□□□□□ -1.68
HMGCS2P54868 AC092647.1-201ENST00000420654 287 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 HSPE1P16-201ENST00000426640 348 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 RPL23AP83-201ENST00000434984 473 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 MAPRE1P3-201ENST00000435438 796 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCS2P54868 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.58□□□□□ -1.68
HMGCS2P54868 AL591363.1-201ENST00000450091 483 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.58□□□□□ -1.68
HMGCS2P54868 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCS2P54868 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCS2P54868 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCS2P54868 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCS2P54868 AC006499.5-201ENST00000505037 514 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 AC006499.6-201ENST00000511169 607 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 ACTR6P1-201ENST00000514311 1104 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 AC007991.1-201ENST00000522680 631 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCS2P54868 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCS2P54868 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS2P54868 AC079171.1-201ENST00000568788 914 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCS2P54868 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.58□□□□□ -1.68
HMGCS2P54868 SNX6P1-201ENST00000601728 1224 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 AC019176.2-201ENST00000611579 315 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 AC026368.1-201ENST00000614934 690 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 AC084757.4-201ENST00000616350 526 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 AC015908.5-201ENST00000623289 343 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGCS2P54868 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGCS2P54868 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGCS2P54868 AF001550.2-201ENST00000636643 217 ntBASIC4.58□□□□□ -1.68
HMGCS2P54868 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS2P54868 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS2P54868 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGCS2P54868 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGCS2P54868 RNU6-819P-201ENST00000364116 107 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGCS2P54868 U1.1-201ENST00000384101 164 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 SNORD3H-201ENST00000384486 214 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 RPL17P50-201ENST00000396131 546 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 VN1R8P-201ENST00000407739 893 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 SYF2P2-201ENST00000417620 583 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGCS2P54868 SKP1P3-201ENST00000429280 487 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 HIGD1AP4-201ENST00000430194 280 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGCS2P54868 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGCS2P54868 AL500527.1-201ENST00000448532 255 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 RPL31P53-201ENST00000457065 348 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 PSMC1P13-201ENST00000458195 985 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 ATG10-AS1-201ENST00000504846 648 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 AC008694.2-201ENST00000517591 306 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 AC087272.1-201ENST00000523624 533 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGCS2P54868 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMGCS2P54868 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGCS2P54868 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.57□□□□□ -1.68
HMGCS2P54868 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMGCS2P54868 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.57□□□□□ -1.68
HMGCS2P54868 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGCS2P54868 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGCS2P54868 AC124856.1-201ENST00000600819 896 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 SRGNP1-201ENST00000603392 451 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 KATNBL1P1-201ENST00000605192 748 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 SNORD91B-202ENST00000608459 222 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 AP003499.2-201ENST00000624100 483 ntBASIC4.57□□□□□ -1.68
HMGCS2P54868 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGCS2P54868 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
HMGCS2P54868 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGCS2P54868 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
HMGCS2P54868 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGCS2P54868 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGCS2P54868 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGCS2P54868 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGCS2P54868 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGCS2P54868 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGCS2P54868 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGCS2P54868 RNU6-386P-201ENST00000362650 107 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGCS2P54868 AC019070.1-201ENST00000415008 1024 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 HMGN2P31-201ENST00000432430 273 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGCS2P54868 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.56□□□□□ -1.68
HMGCS2P54868 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGCS2P54868 AC017099.1-201ENST00000448261 1028 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 PDSS1P2-201ENST00000449397 678 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 NPM1P39-201ENST00000449818 867 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms