Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NEK3P51956 RNA5SP90-201ENST00000364801 99 ntBASIC5.24□□□□□ -1.57
NEK3P51956 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NEK3P51956 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NEK3P51956 RNU6-921P-201ENST00000384361 107 ntBASIC5.24□□□□□ -1.57
NEK3P51956 AL645733.1-201ENST00000402250 217 ntBASIC5.24□□□□□ -1.57
NEK3P51956 AL589647.1-201ENST00000402485 466 ntBASIC5.24□□□□□ -1.57
NEK3P51956 U3.32-201ENST00000408116 212 ntBASIC5.24□□□□□ -1.57
NEK3P51956 MIR1182-201ENST00000408363 97 ntBASIC5.24□□□□□ -1.57
NEK3P51956 AC092634.6-201ENST00000418558 192 ntBASIC5.24□□□□□ -1.57
NEK3P51956 AL591719.1-201ENST00000444669 744 ntBASIC5.24□□□□□ -1.57
NEK3P51956 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.24□□□□□ -1.57
NEK3P51956 RNA5SP103-201ENST00000459503 118 ntBASIC5.24□□□□□ -1.57
NEK3P51956 RPS4XP12-201ENST00000461747 709 ntBASIC5.24□□□□□ -1.57
NEK3P51956 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.24□□□□□ -1.57
NEK3P51956 AC005726.1-201ENST00000494679 427 ntBASIC5.24□□□□□ -1.57
NEK3P51956 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.24□□□□□ -1.57
NEK3P51956 AC034244.1-201ENST00000507687 207 ntBASIC5.24□□□□□ -1.57
NEK3P51956 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NEK3P51956 AC006427.1-201ENST00000514359 712 ntBASIC5.24□□□□□ -1.57
NEK3P51956 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.24□□□□□ -1.57
NEK3P51956 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
NEK3P51956 MTND2P26-201ENST00000528255 1029 ntBASIC5.24□□□□□ -1.57
NEK3P51956 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.24□□□□□ -1.57
NEK3P51956 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.24□□□□□ -1.57
NEK3P51956 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.24□□□□□ -1.57
NEK3P51956 AC009097.3-201ENST00000563557 1018 ntBASIC5.24□□□□□ -1.57
NEK3P51956 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.24□□□□□ -1.57
NEK3P51956 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.24□□□□□ -1.57
NEK3P51956 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NEK3P51956 AC091057.2-201ENST00000602594 792 ntBASIC5.24□□□□□ -1.57
NEK3P51956 AC008814.1-201ENST00000603797 406 ntBASIC5.24□□□□□ -1.57
NEK3P51956 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.24□□□□□ -1.57
NEK3P51956 AC090510.2-201ENST00000617465 629 ntBASIC5.24□□□□□ -1.57
NEK3P51956 AC068722.2-201ENST00000618734 544 ntBASIC5.24□□□□□ -1.57
NEK3P51956 AC009452.1-201ENST00000640823 606 ntBASIC5.24□□□□□ -1.57
NEK3P51956 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.24□□□□□ -1.57
NEK3P51956 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.24□□□□□ -1.57
NEK3P51956 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.24□□□□□ -1.57
NEK3P51956 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NEK3P51956 AC011447.7-201ENST00000624228 1590 ntBASIC5.24□□□□□ -1.57
NEK3P51956 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NEK3P51956 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NEK3P51956 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NEK3P51956 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.23□□□□□ -1.57
NEK3P51956 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.23□□□□□ -1.57
NEK3P51956 Z73965.1-201ENST00000623412 2297 ntBASIC5.23□□□□□ -1.57
NEK3P51956 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.23□□□□□ -1.57
NEK3P51956 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.23□□□□□ -1.57
NEK3P51956 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NEK3P51956 AL731566.1-201ENST00000620490 1937 ntBASIC5.23□□□□□ -1.57
NEK3P51956 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
NEK3P51956 RNU6-1243P-201ENST00000364028 107 ntBASIC5.23□□□□□ -1.57
NEK3P51956 MIR649-201ENST00000384843 97 ntBASIC5.23□□□□□ -1.57
NEK3P51956 ZNF603P-201ENST00000405613 487 ntBASIC5.23□□□□□ -1.57
NEK3P51956 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.23□□□□□ -1.57
NEK3P51956 AL133384.1-201ENST00000412744 351 ntBASIC5.23□□□□□ -1.57
NEK3P51956 NRBF2P2-201ENST00000413087 861 ntBASIC5.23□□□□□ -1.57
NEK3P51956 RPL31P2-201ENST00000413849 377 ntBASIC5.23□□□□□ -1.57
NEK3P51956 LUZP4P1-201ENST00000415420 344 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.23□□□□□ -1.57
NEK3P51956 MTCO3P1-205ENST00000422088 832 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AC004448.2-201ENST00000422360 586 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.23□□□□□ -1.57
NEK3P51956 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.23□□□□□ -1.57
NEK3P51956 TMX2P1-201ENST00000436507 708 ntBASIC5.23□□□□□ -1.57
NEK3P51956 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.23□□□□□ -1.57
NEK3P51956 TPTE2P3-201ENST00000441562 1189 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AC092647.3-201ENST00000443044 633 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.23□□□□□ -1.57
NEK3P51956 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.23□□□□□ -1.57
NEK3P51956 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.23□□□□□ -1.57
NEK3P51956 AC092647.2-201ENST00000452998 253 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.23□□□□□ -1.57
NEK3P51956 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.23□□□□□ -1.57
NEK3P51956 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.23□□□□□ -1.57
NEK3P51956 RN7SL189P-201ENST00000468631 289 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AC097484.1-201ENST00000471148 389 ntBASIC5.23□□□□□ -1.57
NEK3P51956 RN7SL97P-201ENST00000486780 299 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.23□□□□□ -1.57
NEK3P51956 AC098862.1-201ENST00000504991 413 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AC104057.1-201ENST00000515547 497 ntBASIC5.23□□□□□ -1.57
NEK3P51956 SNORA48.10-201ENST00000516965 160 ntBASIC5.23□□□□□ -1.57
NEK3P51956 RNU6-1261P-201ENST00000517194 104 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AP000676.2-201ENST00000529711 301 ntBASIC5.23□□□□□ -1.57
NEK3P51956 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NEK3P51956 CYCSP28-201ENST00000534284 321 ntBASIC5.23□□□□□ -1.57
NEK3P51956 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.23□□□□□ -1.57
NEK3P51956 MIR4646-201ENST00000580775 63 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.23□□□□□ -1.57
NEK3P51956 AP005262.1-201ENST00000582646 997 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.23□□□□□ -1.57
NEK3P51956 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.23□□□□□ -1.57
NEK3P51956 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NEK3P51956 AC009220.3-201ENST00000604318 586 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AC018695.5-201ENST00000605872 315 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AC015914.2-201ENST00000618167 288 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AC073348.1-201ENST00000623002 331 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AL356863.1-201ENST00000623378 1080 ntBASIC5.23□□□□□ -1.57
NEK3P51956 AC098679.5-201ENST00000624394 571 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms