Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC096533.1-201ENST00000411645 353 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 LINC01881-201ENST00000416103 412 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN3P51790 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCN3P51790 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCN3P51790 USP12PY-201ENST00000427677 1064 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCN3P51790 HSFY3P-201ENST00000444242 1191 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCN3P51790 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCN3P51790 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN3P51790 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN3P51790 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN3P51790 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCN3P51790 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.85□□□□□ -1.63
CLCN3P51790 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN3P51790 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.85□□□□□ -1.63
CLCN3P51790 AC108475.1-201ENST00000507880 950 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 ATP1B1P1-201ENST00000509767 915 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCN3P51790 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCN3P51790 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.85□□□□□ -1.63
CLCN3P51790 AL109766.1-201ENST00000555080 552 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCN3P51790 NPM1P47-201ENST00000560843 856 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 AC084759.1-201ENST00000561168 290 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 ATP5F1P7-201ENST00000567330 760 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCN3P51790 AC125494.3-201ENST00000602759 455 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 AC068313.1-201ENST00000604028 1008 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 AL354984.3-201ENST00000604803 325 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 AL160290.3-201ENST00000604869 165 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 AC013244.3-201ENST00000605614 388 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CLCN3P51790 uc_338.9-201ENST00000617424 182 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 AC091905.2-201ENST00000623143 306 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 AP000770.2-201ENST00000623694 100 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 MIR3653-201ENST00000625572 110 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCN3P51790 AC097655.1-201ENST00000635075 318 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.85□□□□□ -1.63
CLCN3P51790 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCN3P51790 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CLCN3P51790 AC009951.1-201ENST00000623674 2614 ntBASIC4.85□□□□□ -1.63
CLCN3P51790 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLCN3P51790 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLCN3P51790 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLCN3P51790 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLCN3P51790 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.84□□□□□ -1.63
CLCN3P51790 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLCN3P51790 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLCN3P51790 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLCN3P51790 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
CLCN3P51790 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CLCN3P51790 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CLCN3P51790 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.84□□□□□ -1.63
CLCN3P51790 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLCN3P51790 AL359643.1-201ENST00000404109 423 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 SNORA11F-201ENST00000408237 128 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.84□□□□□ -1.63
CLCN3P51790 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.84□□□□□ -1.63
CLCN3P51790 AC106883.1-201ENST00000418805 562 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCN3P51790 TCEA1P2-201ENST00000420496 906 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCN3P51790 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCN3P51790 AC000041.1-201ENST00000439655 175 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 AC114495.1-201ENST00000441274 436 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 RRM2P4-201ENST00000441721 562 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.84□□□□□ -1.63
CLCN3P51790 RPL23AP12-201ENST00000467573 473 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 AC104982.1-201ENST00000478775 574 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 RN7SKP21-201ENST00000516503 220 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.84□□□□□ -1.63
CLCN3P51790 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCN3P51790 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.84□□□□□ -1.63
CLCN3P51790 OR5BC1P-201ENST00000529327 739 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 AC118942.1-201ENST00000529674 1035 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCN3P51790 RN7SL176P-201ENST00000580352 264 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 AP005262.1-201ENST00000582646 997 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 RN7SL435P-201ENST00000584418 282 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 RN7SL622P-201ENST00000585292 275 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 AL357094.1-201ENST00000603845 844 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 AC023813.4-201ENST00000607580 580 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.84□□□□□ -1.63
CLCN3P51790 AL669942.2-201ENST00000620352 697 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCN3P51790 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCN3P51790 AC024595.1-201ENST00000623088 387 ntBASIC4.84□□□□□ -1.63
CLCN3P51790 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.84□□□□□ -1.63
CLCN3P51790 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLCN3P51790 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CLCN3P51790 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLCN3P51790 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CLCN3P51790 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
CLCN3P51790 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLCN3P51790 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms