Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 FTH1P6-201ENST00000430768 320 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.7□□□□□ -1.82
CX3CR1P49238 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CR1P49238 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CR1P49238 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CR1P49238 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CR1P49238 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.7□□□□□ -1.82
CX3CR1P49238 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.7□□□□□ -1.82
CX3CR1P49238 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CR1P49238 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CR1P49238 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CR1P49238 AC012414.2-201ENST00000559474 187 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.7□□□□□ -1.82
CX3CR1P49238 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.7□□□□□ -1.82
CX3CR1P49238 SUMO2P14-201ENST00000604488 293 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 U6.48-201ENST00000618523 106 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 MIR7703-201ENST00000620784 77 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 AL445363.3-201ENST00000623080 671 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 AL359715.5-201ENST00000623431 443 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.7□□□□□ -1.82
CX3CR1P49238 AC008013.2-202ENST00000637965 364 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CR1P49238 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CR1P49238 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CX3CR1P49238 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.7□□□□□ -1.82
CX3CR1P49238 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CR1P49238 DDX6P1-205ENST00000441966 1436 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 MAPK10-253ENST00000641010 4072 ntBASIC3.7□□□□□ -1.82
CX3CR1P49238 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CR1P49238 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CX3CR1P49238 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CR1P49238 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
CX3CR1P49238 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.69□□□□□ -1.82
CX3CR1P49238 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CR1P49238 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CR1P49238 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
CX3CR1P49238 AC017007.4-201ENST00000503353 1352 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CX3CR1P49238 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CR1P49238 RNA5SP502-201ENST00000362694 119 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 RN7SKP44-201ENST00000363602 316 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.69□□□□□ -1.82
CX3CR1P49238 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CR1P49238 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CX3CR1P49238 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CX3CR1P49238 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CR1P49238 RNA5SP36-201ENST00000410197 133 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 RN7SKP177-201ENST00000410567 355 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 AL391219.1-201ENST00000422570 483 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 AC234779.1-201ENST00000425910 285 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 AL157831.1-201ENST00000426134 473 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.69□□□□□ -1.82
CX3CR1P49238 AC105402.2-201ENST00000438503 358 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 HMGB1P16-201ENST00000447155 540 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CR1P49238 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CR1P49238 AL133477.1-201ENST00000457472 514 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 RNU6-775P-201ENST00000459318 96 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 AC006517.1-201ENST00000480485 328 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CR1P49238 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.69□□□□□ -1.82
CX3CR1P49238 BNIP3P41-201ENST00000503774 571 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.69□□□□□ -1.82
CX3CR1P49238 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.69□□□□□ -1.82
CX3CR1P49238 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.69□□□□□ -1.82
CX3CR1P49238 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CR1P49238 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.69□□□□□ -1.82
CX3CR1P49238 AC135001.1-201ENST00000544546 283 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.69□□□□□ -1.82
CX3CR1P49238 NOP56P3-201ENST00000549457 385 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 AC063950.1-201ENST00000552036 308 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.69□□□□□ -1.82
CX3CR1P49238 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.69□□□□□ -1.82
CX3CR1P49238 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.69□□□□□ -1.82
CX3CR1P49238 AC012603.1-201ENST00000606424 528 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.69□□□□□ -1.82
CX3CR1P49238 AC064801.1-201ENST00000612025 407 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CR1P49238 AC099669.2-201ENST00000616549 437 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CR1P49238 AL136964.1-201ENST00000622038 2990 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 AC008785.1-201ENST00000624475 456 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 AL139254.3-201ENST00000641097 674 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CR1P49238 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CR1P49238 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CR1P49238 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CX3CR1P49238 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.69□□□□□ -1.82
CX3CR1P49238 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CR1P49238 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CX3CR1P49238 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CR1P49238 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CR1P49238 NOL8P1-201ENST00000508336 3529 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 MTND4P31-201ENST00000425607 1343 ntBASIC3.69□□□□□ -1.82
CX3CR1P49238 EIF2AP4-201ENST00000424793 1781 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.68□□□□□ -1.82
CX3CR1P49238 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CX3CR1P49238 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CX3CR1P49238 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms