Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX2-1P43699 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX2-1P43699 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX2-1P43699 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.97□□□□□ -1.77
NKX2-1P43699 HNRNPCP4-201ENST00000571636 900 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX2-1P43699 MTND3P13-201ENST00000574391 343 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX2-1P43699 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX2-1P43699 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX2-1P43699 AC022069.1-201ENST00000582910 658 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX2-1P43699 AC069307.1-201ENST00000602820 447 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 SUGT1P3-202ENST00000604259 383 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 ELOCP35-201ENST00000604289 336 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AC107952.2-201ENST00000606048 486 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AP005137.2-201ENST00000609238 400 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AL359535.1-201ENST00000612100 1087 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AC021755.4-201ENST00000616620 456 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AC009159.2-201ENST00000617603 606 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NKX2-1P43699 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
NKX2-1P43699 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NKX2-1P43699 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NKX2-1P43699 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NKX2-1P43699 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX2-1P43699 EOGT-210ENST00000615922 1931 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NKX2-1P43699 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
NKX2-1P43699 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NKX2-1P43699 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
NKX2-1P43699 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NKX2-1P43699 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
NKX2-1P43699 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
NKX2-1P43699 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NKX2-1P43699 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NKX2-1P43699 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NKX2-1P43699 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.96□□□□□ -1.78
NKX2-1P43699 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NKX2-1P43699 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NKX2-1P43699 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NKX2-1P43699 RN7SKP104-201ENST00000362605 328 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 RNU1-20P-201ENST00000363314 162 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.96□□□□□ -1.78
NKX2-1P43699 RNU5A-2P-201ENST00000384337 116 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 SNORD116-12-201ENST00000384468 92 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 AC009804.1-201ENST00000400949 179 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 GSTA8P-201ENST00000404253 637 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 RN7SKP114-201ENST00000410327 279 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 AL390774.1-201ENST00000411924 246 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 AC233981.1-201ENST00000423224 461 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.96□□□□□ -1.78
NKX2-1P43699 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.96□□□□□ -1.78
NKX2-1P43699 C1DP1-201ENST00000426049 402 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.96□□□□□ -1.78
NKX2-1P43699 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC3.96□□□□□ -1.78
NKX2-1P43699 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.96□□□□□ -1.78
NKX2-1P43699 CYCSP6-201ENST00000434498 302 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 RPS26P56-201ENST00000444468 240 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 RPL23AP15-201ENST00000450202 459 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.96□□□□□ -1.78
NKX2-1P43699 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.96□□□□□ -1.78
NKX2-1P43699 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.96□□□□□ -1.78
NKX2-1P43699 AC023141.9-201ENST00000458734 412 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 RPS21P4-201ENST00000487122 248 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 RN7SL547P-201ENST00000490793 290 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.96□□□□□ -1.78
NKX2-1P43699 AC113347.3-201ENST00000509113 148 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 KRT19P6-201ENST00000510983 209 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.96□□□□□ -1.78
NKX2-1P43699 AC134698.5-201ENST00000519444 336 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.96□□□□□ -1.78
NKX2-1P43699 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NKX2-1P43699 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NKX2-1P43699 AP001317.1-201ENST00000531194 960 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 CYCSP28-201ENST00000534284 321 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 AC090312.1-201ENST00000580637 348 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 SNORA74C-1-201ENST00000580726 201 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
NKX2-1P43699 AC068790.7-201ENST00000602347 528 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 AC069304.3-201ENST00000603938 1084 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 AC025811.1-201ENST00000604312 472 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 AC087683.2-201ENST00000611384 326 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NKX2-1P43699 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 AC019226.2-201ENST00000625973 424 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.96□□□□□ -1.78
NKX2-1P43699 CASC19-222ENST00000641321 1173 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
NKX2-1P43699 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.96□□□□□ -1.78
NKX2-1P43699 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.96□□□□□ -1.78
NKX2-1P43699 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 AC091046.3-201ENST00000631455 1574 ntBASIC3.96□□□□□ -1.78
NKX2-1P43699 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NKX2-1P43699 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NKX2-1P43699 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.96□□□□□ -1.78
NKX2-1P43699 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-1P43699 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-1P43699 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms