Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.03□□□□□ -1.6
RFC4P35249 RPL23AP89-201ENST00000439324 255 ntBASIC5.03□□□□□ -1.6
RFC4P35249 AL353748.1-201ENST00000440753 474 ntBASIC5.03□□□□□ -1.6
RFC4P35249 HMGB3P9-201ENST00000441799 583 ntBASIC5.03□□□□□ -1.6
RFC4P35249 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFC4P35249 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.03□□□□□ -1.6
RFC4P35249 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.03□□□□□ -1.6
RFC4P35249 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.03□□□□□ -1.6
RFC4P35249 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.03□□□□□ -1.6
RFC4P35249 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.03□□□□□ -1.6
RFC4P35249 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.03□□□□□ -1.6
RFC4P35249 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.03□□□□□ -1.6
RFC4P35249 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.03□□□□□ -1.6
RFC4P35249 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.03□□□□□ -1.6
RFC4P35249 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
RFC4P35249 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RFC4P35249 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFC4P35249 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFC4P35249 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFC4P35249 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFC4P35249 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFC4P35249 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFC4P35249 EOGT-210ENST00000615922 1931 ntBASIC5.03□□□□□ -1.6
RFC4P35249 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFC4P35249 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
RFC4P35249 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.03□□□□□ -1.6
RFC4P35249 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RFC4P35249 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFC4P35249 RNU6-697P-201ENST00000363348 107 ntBASIC5.02□□□□□ -1.61
RFC4P35249 ZNF602P-201ENST00000405929 924 ntBASIC5.02□□□□□ -1.61
RFC4P35249 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.02□□□□□ -1.61
RFC4P35249 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.02□□□□□ -1.61
RFC4P35249 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.02□□□□□ -1.61
RFC4P35249 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.02□□□□□ -1.61
RFC4P35249 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFC4P35249 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.02□□□□□ -1.61
RFC4P35249 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.02□□□□□ -1.61
RFC4P35249 OR6C71P-201ENST00000432580 913 ntBASIC5.02□□□□□ -1.61
RFC4P35249 HSPD1P21-201ENST00000436541 245 ntBASIC5.02□□□□□ -1.61
RFC4P35249 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.02□□□□□ -1.61
RFC4P35249 RN7SL293P-201ENST00000481765 281 ntBASIC5.02□□□□□ -1.61
RFC4P35249 AC012158.1-204ENST00000483430 465 ntBASIC5.02□□□□□ -1.61
RFC4P35249 CAB39P1-201ENST00000502277 460 ntBASIC5.02□□□□□ -1.61
RFC4P35249 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.02□□□□□ -1.61
RFC4P35249 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.02□□□□□ -1.61
RFC4P35249 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.02□□□□□ -1.61
RFC4P35249 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.02□□□□□ -1.61
RFC4P35249 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.02□□□□□ -1.61
RFC4P35249 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.02□□□□□ -1.61
RFC4P35249 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.02□□□□□ -1.61
RFC4P35249 AC090312.1-201ENST00000580637 348 ntBASIC5.02□□□□□ -1.61
RFC4P35249 AC092354.2-201ENST00000607786 514 ntBASIC5.02□□□□□ -1.61
RFC4P35249 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.02□□□□□ -1.61
RFC4P35249 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.02□□□□□ -1.61
RFC4P35249 AP005264.7-201ENST00000625003 745 ntBASIC5.02□□□□□ -1.61
RFC4P35249 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFC4P35249 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFC4P35249 MAPK10-372ENST00000641954 3413 ntBASIC5.02□□□□□ -1.61
RFC4P35249 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFC4P35249 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.01□□□□□ -1.61
RFC4P35249 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.01□□□□□ -1.61
RFC4P35249 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RFC4P35249 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.01□□□□□ -1.61
RFC4P35249 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFC4P35249 RNA5SP399-201ENST00000364003 117 ntBASIC5.01□□□□□ -1.61
RFC4P35249 AC019155.1-201ENST00000382242 574 ntBASIC5.01□□□□□ -1.61
RFC4P35249 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.01□□□□□ -1.61
RFC4P35249 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.01□□□□□ -1.61
RFC4P35249 AL591419.1-201ENST00000427423 339 ntBASIC5.01□□□□□ -1.61
RFC4P35249 AL121578.1-201ENST00000428051 892 ntBASIC5.01□□□□□ -1.61
RFC4P35249 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.01□□□□□ -1.61
RFC4P35249 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFC4P35249 RNA5SP103-201ENST00000459503 118 ntBASIC5.01□□□□□ -1.61
RFC4P35249 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.01□□□□□ -1.61
RFC4P35249 HAUS1P1-201ENST00000505275 832 ntBASIC5.01□□□□□ -1.61
RFC4P35249 AC104619.4-201ENST00000510773 249 ntBASIC5.01□□□□□ -1.61
RFC4P35249 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.01□□□□□ -1.61
RFC4P35249 RN7SKP46-201ENST00000515942 234 ntBASIC5.01□□□□□ -1.61
RFC4P35249 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.01□□□□□ -1.61
RFC4P35249 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.01□□□□□ -1.61
RFC4P35249 AC037471.2-201ENST00000564941 598 ntBASIC5.01□□□□□ -1.61
RFC4P35249 AC097505.1-201ENST00000610199 565 ntBASIC5.01□□□□□ -1.61
RFC4P35249 AP001642.1-201ENST00000624727 2117 ntBASIC5.01□□□□□ -1.61
RFC4P35249 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.01□□□□□ -1.61
RFC4P35249 AC027290.2-201ENST00000623210 18662 ntBASIC5.01□□□□□ -1.61
RFC4P35249 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFC4P35249 MTND5P1-201ENST00000445440 1375 ntBASIC5.01□□□□□ -1.61
RFC4P35249 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.01□□□□□ -1.61
RFC4P35249 AC083843.3-201ENST00000623679 2186 ntBASIC5.01□□□□□ -1.61
RFC4P35249 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.01□□□□□ -1.61
RFC4P35249 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RFC4P35249 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5□□□□□ -1.61
RFC4P35249 SUPT16HP1-201ENST00000537175 3133 ntBASIC5□□□□□ -1.61
RFC4P35249 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFC4P35249 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
RFC4P35249 AC093535.2-201ENST00000624769 2326 ntBASIC5□□□□□ -1.61
RFC4P35249 OR10AB1P-202ENST00000641219 1686 ntBASIC5□□□□□ -1.61
RFC4P35249 U1.1-201ENST00000384101 164 ntBASIC5□□□□□ -1.61
RFC4P35249 AC093719.1-202ENST00000392735 373 ntBASIC5□□□□□ -1.61
RFC4P35249 AC073136.2-201ENST00000417282 849 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms