Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CPS1P31327 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CPS1P31327 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.41□□□□□ -1.54
CPS1P31327 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CPS1P31327 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CPS1P31327 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.41□□□□□ -1.54
CPS1P31327 TAF9BP1-201ENST00000396646 746 ntBASIC5.41□□□□□ -1.54
CPS1P31327 ARL4AP3-201ENST00000441452 574 ntBASIC5.41□□□□□ -1.54
CPS1P31327 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.41□□□□□ -1.54
CPS1P31327 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.41□□□□□ -1.54
CPS1P31327 AC010342.1-201ENST00000514047 877 ntBASIC5.41□□□□□ -1.54
CPS1P31327 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.41□□□□□ -1.54
CPS1P31327 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.41□□□□□ -1.54
CPS1P31327 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CPS1P31327 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.41□□□□□ -1.54
CPS1P31327 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CPS1P31327 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.41□□□□□ -1.54
CPS1P31327 AC092111.2-201ENST00000611627 1414 ntBASIC5.41□□□□□ -1.54
CPS1P31327 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.41□□□□□ -1.54
CPS1P31327 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CPS1P31327 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CPS1P31327 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
CPS1P31327 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CPS1P31327 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CPS1P31327 RNU1-15P-201ENST00000353977 144 ntBASIC5.4□□□□□ -1.54
CPS1P31327 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.4□□□□□ -1.54
CPS1P31327 RNF19BPX-201ENST00000426224 625 ntBASIC5.4□□□□□ -1.54
CPS1P31327 AC017083.1-201ENST00000428093 483 ntBASIC5.4□□□□□ -1.54
CPS1P31327 AC087650.1-201ENST00000431445 468 ntBASIC5.4□□□□□ -1.54
CPS1P31327 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.4□□□□□ -1.54
CPS1P31327 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.4□□□□□ -1.54
CPS1P31327 AC025554.1-201ENST00000505641 188 ntBASIC5.4□□□□□ -1.54
CPS1P31327 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC5.4□□□□□ -1.54
CPS1P31327 RNU2-27P-201ENST00000516185 142 ntBASIC5.4□□□□□ -1.54
CPS1P31327 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.4□□□□□ -1.54
CPS1P31327 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.4□□□□□ -1.54
CPS1P31327 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.4□□□□□ -1.54
CPS1P31327 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.4□□□□□ -1.54
CPS1P31327 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.4□□□□□ -1.54
CPS1P31327 MIR6715A-201ENST00000615929 79 ntBASIC5.4□□□□□ -1.54
CPS1P31327 AC119674.1-207ENST00000641355 633 ntBASIC5.4□□□□□ -1.54
CPS1P31327 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CPS1P31327 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CPS1P31327 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.4□□□□□ -1.55
CPS1P31327 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CPS1P31327 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CPS1P31327 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.4□□□□□ -1.55
CPS1P31327 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CPS1P31327 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
CPS1P31327 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.4□□□□□ -1.55
CPS1P31327 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CPS1P31327 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CPS1P31327 RPL23AP57-201ENST00000332361 466 ntBASIC5.39□□□□□ -1.55
CPS1P31327 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.39□□□□□ -1.55
CPS1P31327 MTND4LP20-201ENST00000402379 270 ntBASIC5.39□□□□□ -1.55
CPS1P31327 PSMC1P13-201ENST00000458195 985 ntBASIC5.39□□□□□ -1.55
CPS1P31327 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.39□□□□□ -1.55
CPS1P31327 AGGF1P3-201ENST00000493675 1213 ntBASIC5.39□□□□□ -1.55
CPS1P31327 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.39□□□□□ -1.55
CPS1P31327 HIGD1AP3-201ENST00000515857 278 ntBASIC5.39□□□□□ -1.55
CPS1P31327 AC008802.1-201ENST00000519121 791 ntBASIC5.39□□□□□ -1.55
CPS1P31327 OR5M7P-201ENST00000526140 972 ntBASIC5.39□□□□□ -1.55
CPS1P31327 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.39□□□□□ -1.55
CPS1P31327 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.39□□□□□ -1.55
CPS1P31327 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.39□□□□□ -1.55
CPS1P31327 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.39□□□□□ -1.55
CPS1P31327 CDY3P-201ENST00000454543 1618 ntBASIC5.39□□□□□ -1.55
CPS1P31327 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CPS1P31327 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.39□□□□□ -1.55
CPS1P31327 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CPS1P31327 AL353743.1-202ENST00000431724 1695 ntBASIC5.39□□□□□ -1.55
CPS1P31327 AL355596.1-201ENST00000565399 3996 ntBASIC5.39□□□□□ -1.55
CPS1P31327 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CPS1P31327 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CPS1P31327 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.39□□□□□ -1.55
CPS1P31327 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CPS1P31327 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CPS1P31327 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CPS1P31327 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.39□□□□□ -1.55
CPS1P31327 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CPS1P31327 VDAC2P1-201ENST00000399358 958 ntBASIC5.38□□□□□ -1.55
CPS1P31327 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.38□□□□□ -1.55
CPS1P31327 AC096644.3-201ENST00000416788 338 ntBASIC5.38□□□□□ -1.55
CPS1P31327 GEMIN8P3-201ENST00000445417 720 ntBASIC5.38□□□□□ -1.55
CPS1P31327 RBMY2UP-201ENST00000453474 324 ntBASIC5.38□□□□□ -1.55
CPS1P31327 AC020893.1-201ENST00000502452 580 ntBASIC5.38□□□□□ -1.55
CPS1P31327 AC010285.3-201ENST00000511668 676 ntBASIC5.38□□□□□ -1.55
CPS1P31327 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.38□□□□□ -1.55
CPS1P31327 AC069240.1-201ENST00000548774 375 ntBASIC5.38□□□□□ -1.55
CPS1P31327 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.38□□□□□ -1.55
CPS1P31327 LARP7P3-201ENST00000579888 337 ntBASIC5.38□□□□□ -1.55
CPS1P31327 AC026979.4-201ENST00000606555 645 ntBASIC5.38□□□□□ -1.55
CPS1P31327 AL450472.3-201ENST00000615578 367 ntBASIC5.38□□□□□ -1.55
CPS1P31327 AC079684.1-201ENST00000621405 437 ntBASIC5.38□□□□□ -1.55
CPS1P31327 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.38□□□□□ -1.55
CPS1P31327 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CPS1P31327 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.38□□□□□ -1.55
CPS1P31327 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.38□□□□□ -1.55
CPS1P31327 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CPS1P31327 AL365440.1-201ENST00000436135 2167 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms