Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 EIF2S2P5-201ENST00000457635 968 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC8P31273 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HOXC8P31273 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC8P31273 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC8P31273 AC108064.1-201ENST00000513791 460 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 RNU6-1102P-201ENST00000516149 96 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 OR5BC1P-201ENST00000529327 739 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC8P31273 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC8P31273 MIR4760-201ENST00000585040 80 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 HMGB2P1-201ENST00000591146 634 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 AC079880.2-201ENST00000603790 1213 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 AC010201.1-201ENST00000605051 540 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 AC104763.3-201ENST00000613765 618 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HOXC8P31273 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 AL021997.2-201ENST00000615674 271 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 AL163051.2-201ENST00000618976 735 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 CR392039.4-201ENST00000624968 501 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC8P31273 AC104118.1-201ENST00000607625 1589 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 HSPA8P19-201ENST00000505359 1517 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 AC107068.1-201ENST00000563286 4218 ntBASIC4.81□□□□□ -1.64
HOXC8P31273 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC8P31273 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC8P31273 AL133243.3-201ENST00000617415 3004 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC8P31273 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC8P31273 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXC8P31273 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HOXC8P31273 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC8P31273 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXC8P31273 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC8P31273 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXC8P31273 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC8P31273 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HOXC8P31273 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC8P31273 RNU1-14P-201ENST00000362759 152 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 RNU6-252P-201ENST00000363232 107 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 RN7SKP235-201ENST00000410662 305 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 RN7SKP97-201ENST00000410966 333 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 VTA1P1-201ENST00000414044 866 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 MTND4P11-201ENST00000417020 1058 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 SFR1P2-201ENST00000421841 730 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXC8P31273 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXC8P31273 RPL7P29-201ENST00000437151 728 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 MTND6P18-201ENST00000439477 513 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC8P31273 TPTE2P6-202ENST00000445572 1007 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 AC239367.2-201ENST00000447309 705 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 AL359073.1-201ENST00000448036 403 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC8P31273 RPL5P32-201ENST00000454085 879 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC8P31273 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC8P31273 ATP5G1P3-201ENST00000463301 410 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
HOXC8P31273 ATP1B1P1-201ENST00000509767 915 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 RNA5SP303-201ENST00000516192 130 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 RNA5SP73-201ENST00000516744 108 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXC8P31273 MIR1254-2-201ENST00000579553 63 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC8P31273 AC005034.4-201ENST00000603612 899 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 IMMP1LP1-201ENST00000605170 488 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 COX6CP4-201ENST00000605798 228 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 MIR6867-201ENST00000610636 67 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 BNIP3P41-202ENST00000616656 861 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 AC009452.1-201ENST00000640823 606 ntBASIC4.8□□□□□ -1.64
HOXC8P31273 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXC8P31273 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC8P31273 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC8P31273 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC8P31273 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC8P31273 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC8P31273 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
HOXC8P31273 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HOXC8P31273 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HOXC8P31273 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HOXC8P31273 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC8P31273 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXC8P31273 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC8P31273 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXC8P31273 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HOXC8P31273 SPRR2C-201ENST00000290702 219 ntBASIC4.79□□□□□ -1.64
HOXC8P31273 MIR372-201ENST00000362225 67 ntBASIC4.79□□□□□ -1.64
HOXC8P31273 RNA5SP307-201ENST00000362863 116 ntBASIC4.79□□□□□ -1.64
HOXC8P31273 RNU1-64P-201ENST00000365443 163 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms