Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 GNG5P1-201ENST00000255500 204 ntBASIC4.41□□□□□ -1.7
COL4A5P29400 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COL4A5P29400 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.41□□□□□ -1.7
COL4A5P29400 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
COL4A5P29400 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A5P29400 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.41□□□□□ -1.7
COL4A5P29400 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.41□□□□□ -1.7
COL4A5P29400 MIR4325-201ENST00000583049 90 ntBASIC4.41□□□□□ -1.7
COL4A5P29400 AP000255.1-201ENST00000610276 676 ntBASIC4.41□□□□□ -1.7
COL4A5P29400 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.41□□□□□ -1.7
COL4A5P29400 OR6C71P-202ENST00000641886 1107 ntBASIC4.41□□□□□ -1.7
COL4A5P29400 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A5P29400 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A5P29400 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.41□□□□□ -1.7
COL4A5P29400 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A5P29400 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.41□□□□□ -1.7
COL4A5P29400 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
COL4A5P29400 AC090337.1-201ENST00000579651 2074 ntBASIC4.41□□□□□ -1.7
COL4A5P29400 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A5P29400 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A5P29400 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
COL4A5P29400 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A5P29400 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.41□□□□□ -1.7
COL4A5P29400 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.41□□□□□ -1.7
COL4A5P29400 AC091862.1-201ENST00000438016 1100 ntBASIC4.41□□□□□ -1.7
COL4A5P29400 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.41□□□□□ -1.7
COL4A5P29400 MTND6P5-201ENST00000448266 512 ntBASIC4.41□□□□□ -1.7
COL4A5P29400 RN7SL585P-201ENST00000470538 280 ntBASIC4.41□□□□□ -1.7
COL4A5P29400 AC108941.1-201ENST00000502853 530 ntBASIC4.41□□□□□ -1.7
COL4A5P29400 AC009303.3-201ENST00000591103 736 ntBASIC4.41□□□□□ -1.7
COL4A5P29400 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.41□□□□□ -1.7
COL4A5P29400 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.41□□□□□ -1.7
COL4A5P29400 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.41□□□□□ -1.7
COL4A5P29400 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
COL4A5P29400 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A5P29400 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL4A5P29400 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL4A5P29400 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
COL4A5P29400 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
COL4A5P29400 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL4A5P29400 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.4□□□□□ -1.7
COL4A5P29400 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
COL4A5P29400 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL4A5P29400 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.4□□□□□ -1.71
COL4A5P29400 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL4A5P29400 HLA-N-201ENST00000437516 135 ntBASIC4.4□□□□□ -1.71
COL4A5P29400 RN7SL807P-201ENST00000470923 297 ntBASIC4.4□□□□□ -1.71
COL4A5P29400 NCAPGP2-201ENST00000557911 754 ntBASIC4.4□□□□□ -1.71
COL4A5P29400 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
COL4A5P29400 AL033523.1-201ENST00000605153 153 ntBASIC4.4□□□□□ -1.71
COL4A5P29400 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.4□□□□□ -1.71
COL4A5P29400 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
COL4A5P29400 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.4□□□□□ -1.71
COL4A5P29400 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL4A5P29400 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A5P29400 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.39□□□□□ -1.71
COL4A5P29400 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL4A5P29400 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A5P29400 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A5P29400 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.39□□□□□ -1.71
COL4A5P29400 Y_RNA.510-201ENST00000384511 114 ntBASIC4.39□□□□□ -1.71
COL4A5P29400 RNA5SP424-201ENST00000390988 115 ntBASIC4.39□□□□□ -1.71
COL4A5P29400 AL031121.1-201ENST00000406553 254 ntBASIC4.39□□□□□ -1.71
COL4A5P29400 BX323014.1-201ENST00000412876 237 ntBASIC4.39□□□□□ -1.71
COL4A5P29400 OR51A6P-201ENST00000418680 1004 ntBASIC4.39□□□□□ -1.71
COL4A5P29400 AL671855.1-201ENST00000446875 1203 ntBASIC4.39□□□□□ -1.71
COL4A5P29400 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.39□□□□□ -1.71
COL4A5P29400 UBA52P3-201ENST00000491303 382 ntBASIC4.39□□□□□ -1.71
COL4A5P29400 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.39□□□□□ -1.71
COL4A5P29400 AC002069.2-201ENST00000603580 883 ntBASIC4.39□□□□□ -1.71
COL4A5P29400 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.39□□□□□ -1.71
COL4A5P29400 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A5P29400 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A5P29400 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A5P29400 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A5P29400 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
COL4A5P29400 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL4A5P29400 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A5P29400 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.39□□□□□ -1.71
COL4A5P29400 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
COL4A5P29400 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL4A5P29400 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
COL4A5P29400 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
COL4A5P29400 AC011742.1-201ENST00000431448 434 ntBASIC4.38□□□□□ -1.71
COL4A5P29400 AL035458.1-201ENST00000433096 585 ntBASIC4.38□□□□□ -1.71
COL4A5P29400 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.38□□□□□ -1.71
COL4A5P29400 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.38□□□□□ -1.71
COL4A5P29400 TPT1P1-201ENST00000458495 518 ntBASIC4.38□□□□□ -1.71
COL4A5P29400 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A5P29400 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.38□□□□□ -1.71
COL4A5P29400 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.38□□□□□ -1.71
COL4A5P29400 AC023161.2-201ENST00000551218 780 ntBASIC4.38□□□□□ -1.71
COL4A5P29400 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.38□□□□□ -1.71
COL4A5P29400 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.38□□□□□ -1.71
COL4A5P29400 AC010680.3-201ENST00000604215 520 ntBASIC4.38□□□□□ -1.71
COL4A5P29400 AL390816.3-201ENST00000604527 1066 ntBASIC4.38□□□□□ -1.71
COL4A5P29400 MIR7154-201ENST00000620673 73 ntBASIC4.38□□□□□ -1.71
COL4A5P29400 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.38□□□□□ -1.71
COL4A5P29400 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.38□□□□□ -1.71
COL4A5P29400 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms