Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 H3F3BP1-201ENST00000440551 403 ntBASIC6.89□□□□□ -1.31
RXRBP28702 TCEA1P3-201ENST00000443005 880 ntBASIC6.89□□□□□ -1.31
RXRBP28702 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.89□□□□□ -1.31
RXRBP28702 ARL2BPP10-201ENST00000446487 531 ntBASIC6.89□□□□□ -1.31
RXRBP28702 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.89□□□□□ -1.31
RXRBP28702 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.89□□□□□ -1.31
RXRBP28702 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.89□□□□□ -1.31
RXRBP28702 AC116337.2-201ENST00000477662 156 ntBASIC6.89□□□□□ -1.31
RXRBP28702 AC079080.1-201ENST00000479841 822 ntBASIC6.89□□□□□ -1.31
RXRBP28702 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC6.89□□□□□ -1.31
RXRBP28702 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.89□□□□□ -1.31
RXRBP28702 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.89□□□□□ -1.31
RXRBP28702 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RXRBP28702 RNA5SP43-201ENST00000516559 110 ntBASIC6.89□□□□□ -1.31
RXRBP28702 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.89□□□□□ -1.31
RXRBP28702 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.89□□□□□ -1.31
RXRBP28702 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.89□□□□□ -1.31
RXRBP28702 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC6.89□□□□□ -1.31
RXRBP28702 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RXRBP28702 NPM1P5-201ENST00000557228 838 ntBASIC6.89□□□□□ -1.31
RXRBP28702 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.89□□□□□ -1.31
RXRBP28702 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.89□□□□□ -1.31
RXRBP28702 AC015871.2-201ENST00000603605 948 ntBASIC6.89□□□□□ -1.31
RXRBP28702 AC104260.1-201ENST00000616660 539 ntBASIC6.89□□□□□ -1.31
RXRBP28702 AC006133.1-201ENST00000617106 264 ntBASIC6.89□□□□□ -1.31
RXRBP28702 ZYXP1-201ENST00000617638 118 ntBASIC6.89□□□□□ -1.31
RXRBP28702 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
RXRBP28702 OR5H6-203ENST00000642105 978 ntBASIC6.89□□□□□ -1.31
RXRBP28702 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RXRBP28702 AC017007.4-201ENST00000503353 1352 ntBASIC6.89□□□□□ -1.31
RXRBP28702 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RXRBP28702 CYP1D1P-201ENST00000416662 1433 ntBASIC6.89□□□□□ -1.31
RXRBP28702 AL157700.1-201ENST00000561973 1432 ntBASIC6.89□□□□□ -1.31
RXRBP28702 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RXRBP28702 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.89□□□□□ -1.31
RXRBP28702 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RXRBP28702 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
RXRBP28702 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.89□□□□□ -1.31
RXRBP28702 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RXRBP28702 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RXRBP28702 AL138820.1-201ENST00000617901 5305 ntBASIC6.89□□□□□ -1.31
RXRBP28702 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 AC068769.1-201ENST00000474767 2426 ntBASIC6.88□□□□□ -1.31
RXRBP28702 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 RBPJP2-201ENST00000618187 1444 ntBASIC6.88□□□□□ -1.31
RXRBP28702 SNORA70F-201ENST00000384142 135 ntBASIC6.88□□□□□ -1.31
RXRBP28702 HMGB3P7-201ENST00000400214 611 ntBASIC6.88□□□□□ -1.31
RXRBP28702 RPL7P58-201ENST00000402913 758 ntBASIC6.88□□□□□ -1.31
RXRBP28702 AL079342.2-201ENST00000403367 482 ntBASIC6.88□□□□□ -1.31
RXRBP28702 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC6.88□□□□□ -1.31
RXRBP28702 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.88□□□□□ -1.31
RXRBP28702 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.88□□□□□ -1.31
RXRBP28702 OR8F1P-201ENST00000425243 930 ntBASIC6.88□□□□□ -1.31
RXRBP28702 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.88□□□□□ -1.31
RXRBP28702 MTND3P21-201ENST00000433774 331 ntBASIC6.88□□□□□ -1.31
RXRBP28702 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.88□□□□□ -1.31
RXRBP28702 MTCO3P18-201ENST00000440206 761 ntBASIC6.88□□□□□ -1.31
RXRBP28702 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC6.88□□□□□ -1.31
RXRBP28702 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.88□□□□□ -1.31
RXRBP28702 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.88□□□□□ -1.31
RXRBP28702 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.88□□□□□ -1.31
RXRBP28702 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.88□□□□□ -1.31
RXRBP28702 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.88□□□□□ -1.31
RXRBP28702 RPL17P2-201ENST00000491913 451 ntBASIC6.88□□□□□ -1.31
RXRBP28702 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.88□□□□□ -1.31
RXRBP28702 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.88□□□□□ -1.31
RXRBP28702 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
RXRBP28702 MRPS33P2-201ENST00000507850 322 ntBASIC6.88□□□□□ -1.31
RXRBP28702 TCP11X3P-202ENST00000514289 1254 ntBASIC6.88□□□□□ -1.31
RXRBP28702 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.88□□□□□ -1.31
RXRBP28702 AP001207.1-201ENST00000524051 481 ntBASIC6.88□□□□□ -1.31
RXRBP28702 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.88□□□□□ -1.31
RXRBP28702 AP001880.2-201ENST00000538233 448 ntBASIC6.88□□□□□ -1.31
RXRBP28702 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 EIF5A2P1-201ENST00000564027 460 ntBASIC6.88□□□□□ -1.31
RXRBP28702 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.88□□□□□ -1.31
RXRBP28702 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.88□□□□□ -1.31
RXRBP28702 AC243756.2-201ENST00000618406 463 ntBASIC6.88□□□□□ -1.31
RXRBP28702 AC127502.3-201ENST00000636170 1206 ntBASIC6.88□□□□□ -1.31
RXRBP28702 AC073869.7-201ENST00000640874 297 ntBASIC6.88□□□□□ -1.31
RXRBP28702 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
RXRBP28702 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.88□□□□□ -1.31
RXRBP28702 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.88□□□□□ -1.31
RXRBP28702 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
RXRBP28702 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
RXRBP28702 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RXRBP28702 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.87□□□□□ -1.31
RXRBP28702 CDY11P-201ENST00000447168 1651 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms