Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC4P09017 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC4P09017 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC4P09017 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC4P09017 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC4P09017 AC025627.2-201ENST00000576220 160 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC4P09017 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC4P09017 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC4P09017 AL451086.1-201ENST00000605596 223 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 AC138473.1-201ENST00000605717 526 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 AC023509.5-201ENST00000617434 807 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 AC015908.5-201ENST00000623289 343 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC4P09017 PNPT1P2-201ENST00000456768 2050 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC4P09017 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC4P09017 CASC19-284ENST00000642142 1868 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC4P09017 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HOXC4P09017 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC4P09017 SLC2A3P1-201ENST00000519666 1451 ntBASIC4□□□□□ -1.77
HOXC4P09017 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HOXC4P09017 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HOXC4P09017 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HOXC4P09017 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC4P09017 RNA5SP52-201ENST00000362448 134 ntBASIC4□□□□□ -1.77
HOXC4P09017 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HOXC4P09017 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4□□□□□ -1.77
HOXC4P09017 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC4P09017 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC4P09017 AC093716.1-201ENST00000435923 377 ntBASIC4□□□□□ -1.77
HOXC4P09017 AL353748.1-201ENST00000440753 474 ntBASIC4□□□□□ -1.77
HOXC4P09017 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC4P09017 AC110792.1-201ENST00000491826 472 ntBASIC4□□□□□ -1.77
HOXC4P09017 OR52A4P-203ENST00000498233 1014 ntBASIC4□□□□□ -1.77
HOXC4P09017 AC025445.1-201ENST00000502728 300 ntBASIC4□□□□□ -1.77
HOXC4P09017 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4□□□□□ -1.77
HOXC4P09017 AC006499.6-201ENST00000511169 607 ntBASIC4□□□□□ -1.77
HOXC4P09017 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC4P09017 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
HOXC4P09017 MTHFD2P4-201ENST00000515074 1025 ntBASIC4□□□□□ -1.77
HOXC4P09017 AC117525.1-201ENST00000515228 503 ntBASIC4□□□□□ -1.77
HOXC4P09017 SEC11B-201ENST00000518383 499 ntBASIC4□□□□□ -1.77
HOXC4P09017 IGHV3-63-201ENST00000518422 341 ntBASIC4□□□□□ -1.77
HOXC4P09017 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC4P09017 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4□□□□□ -1.77
HOXC4P09017 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4□□□□□ -1.77
HOXC4P09017 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4□□□□□ -1.77
HOXC4P09017 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4□□□□□ -1.77
HOXC4P09017 NPM1P35-201ENST00000533043 868 ntBASIC4□□□□□ -1.77
HOXC4P09017 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4□□□□□ -1.77
HOXC4P09017 RPL23AP87-202ENST00000573039 466 ntBASIC4□□□□□ -1.77
HOXC4P09017 AC110743.1-201ENST00000584870 478 ntBASIC4□□□□□ -1.77
HOXC4P09017 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4□□□□□ -1.77
HOXC4P09017 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4□□□□□ -1.77
HOXC4P09017 AL139286.1-201ENST00000604465 483 ntBASIC4□□□□□ -1.77
HOXC4P09017 AL109618.2-201ENST00000605527 211 ntBASIC4□□□□□ -1.77
HOXC4P09017 MIR6868-201ENST00000611215 58 ntBASIC4□□□□□ -1.77
HOXC4P09017 MIR6875-201ENST00000617506 72 ntBASIC4□□□□□ -1.77
HOXC4P09017 AL645927.2-201ENST00000618350 349 ntBASIC4□□□□□ -1.77
HOXC4P09017 AL133370.2-201ENST00000619934 439 ntBASIC4□□□□□ -1.77
HOXC4P09017 AL669942.2-201ENST00000620352 697 ntBASIC4□□□□□ -1.77
HOXC4P09017 MIR7154-201ENST00000620673 73 ntBASIC4□□□□□ -1.77
HOXC4P09017 AC008785.1-201ENST00000624475 456 ntBASIC4□□□□□ -1.77
HOXC4P09017 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4□□□□□ -1.77
HOXC4P09017 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
HOXC4P09017 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4□□□□□ -1.77
HOXC4P09017 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4□□□□□ -1.77
HOXC4P09017 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
HOXC4P09017 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
HOXC4P09017 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HOXC4P09017 AC092079.1-201ENST00000558620 1985 ntBASIC4□□□□□ -1.77
HOXC4P09017 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HOXC4P09017 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
HOXC4P09017 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC4P09017 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.99□□□□□ -1.77
HOXC4P09017 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXC4P09017 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC4P09017 HSPD1P11-201ENST00000508643 1702 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC4P09017 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC4P09017 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXC4P09017 HMGB3P19-201ENST00000403971 560 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 MTND3P20-201ENST00000407663 186 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXC4P09017 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXC4P09017 OR5BE1P-201ENST00000425977 939 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXC4P09017 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXC4P09017 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC4P09017 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXC4P09017 AL359073.1-201ENST00000448036 403 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 RPL31P20-201ENST00000449593 360 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 AL354710.1-201ENST00000453641 246 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 VN1R105P-201ENST00000486595 910 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 KRT19P6-201ENST00000510983 209 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC4P09017 AC090819.1-201ENST00000523800 1111 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms