Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.26□□□□□ -1.89
CTSDP07339 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.26□□□□□ -1.89
CTSDP07339 COX6B1P7-201ENST00000430845 235 ntBASIC3.26□□□□□ -1.89
CTSDP07339 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.26□□□□□ -1.89
CTSDP07339 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.26□□□□□ -1.89
CTSDP07339 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.26□□□□□ -1.89
CTSDP07339 NANOGP10-201ENST00000453325 895 ntBASIC3.26□□□□□ -1.89
CTSDP07339 AC116533.1-201ENST00000459748 321 ntBASIC3.26□□□□□ -1.89
CTSDP07339 AC011276.1-201ENST00000469688 323 ntBASIC3.26□□□□□ -1.89
CTSDP07339 RPL7L1P8-201ENST00000469911 741 ntBASIC3.26□□□□□ -1.89
CTSDP07339 AC007537.2-201ENST00000472093 511 ntBASIC3.26□□□□□ -1.89
CTSDP07339 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CTSDP07339 TRBV12-2-201ENST00000489763 344 ntBASIC3.26□□□□□ -1.89
CTSDP07339 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.26□□□□□ -1.89
CTSDP07339 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.26□□□□□ -1.89
CTSDP07339 RN7SKP209-201ENST00000516888 304 ntBASIC3.26□□□□□ -1.89
CTSDP07339 SUMO2P20-201ENST00000520803 283 ntBASIC3.26□□□□□ -1.89
CTSDP07339 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.26□□□□□ -1.89
CTSDP07339 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.26□□□□□ -1.89
CTSDP07339 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.26□□□□□ -1.89
CTSDP07339 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.26□□□□□ -1.89
CTSDP07339 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.26□□□□□ -1.89
CTSDP07339 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.26□□□□□ -1.89
CTSDP07339 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.26□□□□□ -1.89
CTSDP07339 Z82195.1-201ENST00000604558 398 ntBASIC3.26□□□□□ -1.89
CTSDP07339 AC015849.6-201ENST00000605454 474 ntBASIC3.26□□□□□ -1.89
CTSDP07339 U7.8-201ENST00000619968 63 ntBASIC3.26□□□□□ -1.89
CTSDP07339 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.26□□□□□ -1.89
CTSDP07339 MIR7641-1-201ENST00000627518 61 ntBASIC3.26□□□□□ -1.89
CTSDP07339 OR5AC4P-202ENST00000642086 985 ntBASIC3.26□□□□□ -1.89
CTSDP07339 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTSDP07339 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.26□□□□□ -1.89
CTSDP07339 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.26□□□□□ -1.89
CTSDP07339 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.26□□□□□ -1.89
CTSDP07339 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
CTSDP07339 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTSDP07339 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTSDP07339 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTSDP07339 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTSDP07339 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.25□□□□□ -1.89
CTSDP07339 AC100871.1-201ENST00000507871 1456 ntBASIC3.25□□□□□ -1.89
CTSDP07339 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.25□□□□□ -1.89
CTSDP07339 RNU4-39P-201ENST00000362455 127 ntBASIC3.25□□□□□ -1.89
CTSDP07339 RNA5SP509-201ENST00000364577 119 ntBASIC3.25□□□□□ -1.89
CTSDP07339 SNORA56-201ENST00000383966 129 ntBASIC3.25□□□□□ -1.89
CTSDP07339 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.25□□□□□ -1.89
CTSDP07339 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.25□□□□□ -1.89
CTSDP07339 RPS3AP54-201ENST00000435535 734 ntBASIC3.25□□□□□ -1.89
CTSDP07339 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.25□□□□□ -1.89
CTSDP07339 CBX1P1-201ENST00000440184 427 ntBASIC3.25□□□□□ -1.89
CTSDP07339 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.25□□□□□ -1.89
CTSDP07339 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.25□□□□□ -1.89
CTSDP07339 AL133244.1-201ENST00000456007 258 ntBASIC3.25□□□□□ -1.89
CTSDP07339 AC016687.1-201ENST00000482574 353 ntBASIC3.25□□□□□ -1.89
CTSDP07339 RN7SL604P-201ENST00000492589 296 ntBASIC3.25□□□□□ -1.89
CTSDP07339 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.25□□□□□ -1.89
CTSDP07339 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTSDP07339 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.25□□□□□ -1.89
CTSDP07339 AL121576.1-201ENST00000556055 276 ntBASIC3.25□□□□□ -1.89
CTSDP07339 MIR4284-201ENST00000578924 81 ntBASIC3.25□□□□□ -1.89
CTSDP07339 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTSDP07339 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.25□□□□□ -1.89
CTSDP07339 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CTSDP07339 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CTSDP07339 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CTSDP07339 OR4K17-201ENST00000315543 1032 ntBASIC3.24□□□□□ -1.89
CTSDP07339 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.24□□□□□ -1.89
CTSDP07339 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CTSDP07339 RPL5P19-201ENST00000404228 893 ntBASIC3.24□□□□□ -1.89
CTSDP07339 RN7SKP177-201ENST00000410567 355 ntBASIC3.24□□□□□ -1.89
CTSDP07339 AC127526.1-201ENST00000417526 366 ntBASIC3.24□□□□□ -1.89
CTSDP07339 HMGB3P5-201ENST00000428894 612 ntBASIC3.24□□□□□ -1.89
CTSDP07339 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.24□□□□□ -1.89
CTSDP07339 BTF3P10-201ENST00000433415 495 ntBASIC3.24□□□□□ -1.89
CTSDP07339 HMGB3P10-201ENST00000434734 572 ntBASIC3.24□□□□□ -1.89
CTSDP07339 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.24□□□□□ -1.89
CTSDP07339 RANP8-201ENST00000444720 713 ntBASIC3.24□□□□□ -1.89
CTSDP07339 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.24□□□□□ -1.89
CTSDP07339 AC022431.1-201ENST00000450941 438 ntBASIC3.24□□□□□ -1.89
CTSDP07339 AC243772.1-201ENST00000451620 410 ntBASIC3.24□□□□□ -1.89
CTSDP07339 RPL7P47-201ENST00000497299 556 ntBASIC3.24□□□□□ -1.89
CTSDP07339 NDUFB4P9-201ENST00000511646 388 ntBASIC3.24□□□□□ -1.89
CTSDP07339 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.24□□□□□ -1.89
CTSDP07339 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.24□□□□□ -1.89
CTSDP07339 AC008802.1-201ENST00000519121 791 ntBASIC3.24□□□□□ -1.89
CTSDP07339 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.24□□□□□ -1.89
CTSDP07339 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.24□□□□□ -1.89
CTSDP07339 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.24□□□□□ -1.89
CTSDP07339 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CTSDP07339 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.24□□□□□ -1.89
CTSDP07339 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.24□□□□□ -1.89
CTSDP07339 AC006946.3-201ENST00000609791 756 ntBASIC3.24□□□□□ -1.89
CTSDP07339 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.24□□□□□ -1.89
CTSDP07339 MIR6748-201ENST00000610433 71 ntBASIC3.24□□□□□ -1.89
CTSDP07339 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CTSDP07339 AL121890.3-201ENST00000618494 516 ntBASIC3.24□□□□□ -1.89
CTSDP07339 OR6C71P-202ENST00000641886 1107 ntBASIC3.24□□□□□ -1.89
CTSDP07339 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CTSDP07339 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CTSDP07339 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms