Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC023389.2-201ENST00000580031 955 ntBASIC4.65□□□□□ -1.66
COL2A1P02458 MIR5195-201ENST00000583555 115 ntBASIC4.65□□□□□ -1.66
COL2A1P02458 AP000770.2-201ENST00000623694 100 ntBASIC4.65□□□□□ -1.66
COL2A1P02458 U6.105-201ENST00000637379 88 ntBASIC4.65□□□□□ -1.66
COL2A1P02458 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL2A1P02458 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COL2A1P02458 AP002001.2-201ENST00000529025 1469 ntBASIC4.65□□□□□ -1.67
COL2A1P02458 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.65□□□□□ -1.67
COL2A1P02458 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.65□□□□□ -1.67
COL2A1P02458 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL2A1P02458 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL2A1P02458 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
COL2A1P02458 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COL2A1P02458 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
COL2A1P02458 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL2A1P02458 MIR30B-201ENST00000384850 88 ntBASIC4.64□□□□□ -1.67
COL2A1P02458 AL590704.1-201ENST00000402856 794 ntBASIC4.64□□□□□ -1.67
COL2A1P02458 MIR1251-201ENST00000408552 70 ntBASIC4.64□□□□□ -1.67
COL2A1P02458 SNORA3C-201ENST00000408792 125 ntBASIC4.64□□□□□ -1.67
COL2A1P02458 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.64□□□□□ -1.67
COL2A1P02458 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.64□□□□□ -1.67
COL2A1P02458 PPIAP15-201ENST00000479662 484 ntBASIC4.64□□□□□ -1.67
COL2A1P02458 RPS3AP6-201ENST00000484430 795 ntBASIC4.64□□□□□ -1.67
COL2A1P02458 RN7SKP83-201ENST00000516512 178 ntBASIC4.64□□□□□ -1.67
COL2A1P02458 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.64□□□□□ -1.67
COL2A1P02458 IGKV2D-19-201ENST00000523346 262 ntBASIC4.64□□□□□ -1.67
COL2A1P02458 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.64□□□□□ -1.67
COL2A1P02458 AC067805.1-201ENST00000559344 470 ntBASIC4.64□□□□□ -1.67
COL2A1P02458 NPM1P47-201ENST00000560843 856 ntBASIC4.64□□□□□ -1.67
COL2A1P02458 AC018754.1-201ENST00000607486 925 ntBASIC4.64□□□□□ -1.67
COL2A1P02458 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.64□□□□□ -1.67
COL2A1P02458 AC124312.6-202ENST00000623624 418 ntBASIC4.64□□□□□ -1.67
COL2A1P02458 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
COL2A1P02458 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL2A1P02458 AP004289.2-201ENST00000444413 1457 ntBASIC4.64□□□□□ -1.67
COL2A1P02458 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL2A1P02458 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL2A1P02458 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL2A1P02458 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
COL2A1P02458 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL2A1P02458 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.64□□□□□ -1.67
COL2A1P02458 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.64□□□□□ -1.67
COL2A1P02458 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
COL2A1P02458 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.63□□□□□ -1.67
COL2A1P02458 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL2A1P02458 Y_RNA.110-201ENST00000363220 99 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 RNA5SP72-201ENST00000364442 117 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.63□□□□□ -1.67
COL2A1P02458 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.63□□□□□ -1.67
COL2A1P02458 ATP5F1P4-201ENST00000397288 746 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 HDGFP1-201ENST00000405943 252 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.63□□□□□ -1.67
COL2A1P02458 RN7SKP97-201ENST00000410966 333 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.63□□□□□ -1.67
COL2A1P02458 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.63□□□□□ -1.67
COL2A1P02458 AL390879.2-203ENST00000426943 1121 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.63□□□□□ -1.67
COL2A1P02458 PDSS1P2-201ENST00000449397 678 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 AL133162.1-201ENST00000463228 453 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 AC026782.2-201ENST00000510845 636 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 AC021146.3-201ENST00000511911 260 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 AC093853.1-201ENST00000515689 483 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL2A1P02458 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.63□□□□□ -1.67
COL2A1P02458 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.63□□□□□ -1.67
COL2A1P02458 AC023158.1-201ENST00000561632 1025 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL2A1P02458 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.63□□□□□ -1.67
COL2A1P02458 AC005000.2-201ENST00000605468 310 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 PCA3_2.1-201ENST00000612507 409 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 AC022960.3-201ENST00000619794 441 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 AC022306.3-201ENST00000619930 550 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 CU459211.1-201ENST00000635667 749 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL2A1P02458 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
COL2A1P02458 ZNF285B-201ENST00000561698 1767 ntBASIC4.63□□□□□ -1.67
COL2A1P02458 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL2A1P02458 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL2A1P02458 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.62□□□□□ -1.67
COL2A1P02458 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
COL2A1P02458 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL2A1P02458 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL2A1P02458 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL2A1P02458 ZNF602P-201ENST00000405929 924 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 OR51A6P-201ENST00000418680 1004 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 TCEA1P2-201ENST00000420496 906 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.62□□□□□ -1.67
COL2A1P02458 AL645638.1-201ENST00000440519 361 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 CYCSP32-201ENST00000440548 321 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.62□□□□□ -1.67
COL2A1P02458 PRDX3P3-201ENST00000447765 522 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 AC104849.1-201ENST00000462623 405 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
COL2A1P02458 UBE2CP3-201ENST00000502715 450 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.62□□□□□ -1.67
COL2A1P02458 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.62□□□□□ -1.67
COL2A1P02458 SOD1P3-201ENST00000518682 454 ntBASIC4.62□□□□□ -1.67
COL2A1P02458 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.62□□□□□ -1.67
COL2A1P02458 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms