Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CYP1D1P-201ENST00000416662 1433 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 AC119744.1-201ENST00000454746 1715 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 AC093535.2-201ENST00000624769 2326 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 MTND4P12-201ENST00000498999 1377 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.31□□□□□ -1.56
CNOT4O95628 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 MTND5P17-201ENST00000418405 1603 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 AC011447.7-201ENST00000624228 1590 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
CNOT4O95628 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 Y_RNA.9-201ENST00000362354 101 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 RNU1-59P-201ENST00000364829 162 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 XGY1-201ENST00000381172 446 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 Y_RNA.450-201ENST00000384198 113 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 MIR16-1-201ENST00000385271 89 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CNOT4O95628 AL161909.1-201ENST00000397390 712 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.31□□□□□ -1.56
CNOT4O95628 AL139413.1-201ENST00000421309 217 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 AC009237.2-201ENST00000421358 284 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 GAPDHP49-201ENST00000421421 961 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.31□□□□□ -1.56
CNOT4O95628 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.31□□□□□ -1.56
CNOT4O95628 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.31□□□□□ -1.56
CNOT4O95628 EEF1A1P1-201ENST00000447052 739 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 AC239367.2-201ENST00000447309 705 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.31□□□□□ -1.56
CNOT4O95628 AL118496.2-201ENST00000448300 230 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 RPL7P31-201ENST00000450192 724 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.31□□□□□ -1.56
CNOT4O95628 RN7SL273P-201ENST00000481561 299 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.31□□□□□ -1.56
CNOT4O95628 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.31□□□□□ -1.56
CNOT4O95628 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.31□□□□□ -1.56
CNOT4O95628 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.31□□□□□ -1.56
CNOT4O95628 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.31□□□□□ -1.56
CNOT4O95628 ARL2BPP6-201ENST00000512757 439 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 SNORA20.3-201ENST00000516880 132 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 AC008429.4-201ENST00000521201 182 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 TPM3P3-201ENST00000521343 354 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 WBP1LP3-201ENST00000523033 208 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.31□□□□□ -1.56
CNOT4O95628 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.31□□□□□ -1.56
CNOT4O95628 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.31□□□□□ -1.56
CNOT4O95628 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.31□□□□□ -1.56
CNOT4O95628 MIR4716-201ENST00000579628 84 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.31□□□□□ -1.56
CNOT4O95628 AC011477.5-201ENST00000586571 259 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.31□□□□□ -1.56
CNOT4O95628 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.31□□□□□ -1.56
CNOT4O95628 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.31□□□□□ -1.56
CNOT4O95628 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.31□□□□□ -1.56
CNOT4O95628 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.31□□□□□ -1.56
CNOT4O95628 AP000907.4-201ENST00000604143 237 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 AC128687.2-201ENST00000609657 566 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.31□□□□□ -1.56
CNOT4O95628 AL512624.1-201ENST00000613638 469 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 AL353726.1-201ENST00000614041 1000 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 AC138649.3-201ENST00000622154 254 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.31□□□□□ -1.56
CNOT4O95628 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
CNOT4O95628 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.31□□□□□ -1.56
CNOT4O95628 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CNOT4O95628 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.31□□□□□ -1.56
CNOT4O95628 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CNOT4O95628 AC114786.1-201ENST00000512892 1415 ntBASIC5.31□□□□□ -1.56
CNOT4O95628 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CNOT4O95628 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNOT4O95628 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CNOT4O95628 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CNOT4O95628 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.3□□□□□ -1.56
CNOT4O95628 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.3□□□□□ -1.56
CNOT4O95628 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 AC104118.1-201ENST00000607625 1589 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CNOT4O95628 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CNOT4O95628 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
CNOT4O95628 DDX18P3-201ENST00000404856 2007 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms