Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC1.67□□□□□ -2.14
USH2AO75445 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC1.67□□□□□ -2.14
USH2AO75445 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
USH2AO75445 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
USH2AO75445 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
USH2AO75445 OR56B2P-201ENST00000317102 954 ntBASIC1.67□□□□□ -2.14
USH2AO75445 RN7SKP186-201ENST00000365371 303 ntBASIC1.67□□□□□ -2.14
USH2AO75445 SNORA54-201ENST00000384281 123 ntBASIC1.67□□□□□ -2.14
USH2AO75445 WASF1P1-201ENST00000447560 1131 ntBASIC1.67□□□□□ -2.14
USH2AO75445 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.67□□□□□ -2.14
USH2AO75445 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC1.67□□□□□ -2.14
USH2AO75445 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC1.67□□□□□ -2.14
USH2AO75445 AC138907.10-201ENST00000623708 983 ntBASIC1.67□□□□□ -2.14
USH2AO75445 SNX18P3-202ENST00000565670 1750 ntBASIC1.67□□□□□ -2.14
USH2AO75445 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
USH2AO75445 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
USH2AO75445 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
USH2AO75445 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
USH2AO75445 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
USH2AO75445 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC1.67□□□□□ -2.14
USH2AO75445 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC1.67□□□□□ -2.14
USH2AO75445 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.67□□□□□ -2.14
USH2AO75445 TEK-205ENST00000615002 4666 ntTSL 5 BASIC1.67□□□□□ -2.14
USH2AO75445 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
USH2AO75445 SNORD9-201ENST00000362566 104 ntBASIC1.67□□□□□ -2.14
USH2AO75445 RNA5SP50-201ENST00000363731 107 ntBASIC1.67□□□□□ -2.14
USH2AO75445 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC1.67□□□□□ -2.14
USH2AO75445 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC1.67□□□□□ -2.14
USH2AO75445 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC1.67□□□□□ -2.14
USH2AO75445 AC233981.1-201ENST00000423224 461 ntBASIC1.67□□□□□ -2.14
USH2AO75445 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC1.67□□□□□ -2.14
USH2AO75445 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
USH2AO75445 TRIM60P18-201ENST00000441518 828 ntBASIC1.67□□□□□ -2.14
USH2AO75445 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
USH2AO75445 AC069240.1-201ENST00000548774 375 ntBASIC1.67□□□□□ -2.14
USH2AO75445 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC1.67□□□□□ -2.14
USH2AO75445 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
USH2AO75445 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC1.67□□□□□ -2.14
USH2AO75445 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC1.66□□□□□ -2.14
USH2AO75445 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
USH2AO75445 AL592291.1-201ENST00000403830 352 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC1.66□□□□□ -2.14
USH2AO75445 OR6K4P-201ENST00000423179 955 ntBASIC1.66□□□□□ -2.14
USH2AO75445 Z93242.1-201ENST00000427102 353 ntBASIC1.66□□□□□ -2.14
USH2AO75445 CYCSP24-201ENST00000445119 316 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AL109933.2-201ENST00000452651 260 ntBASIC1.66□□□□□ -2.14
USH2AO75445 RPL38P1-201ENST00000460914 211 ntBASIC1.66□□□□□ -2.14
USH2AO75445 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC1.66□□□□□ -2.14
USH2AO75445 PCBP2P3-201ENST00000509726 843 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AL354976.1-201ENST00000613843 387 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AL162274.2-201ENST00000614406 332 ntBASIC1.66□□□□□ -2.14
USH2AO75445 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.66□□□□□ -2.14
USH2AO75445 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 ZNF812P-201ENST00000457674 1694 ntBASIC1.66□□□□□ -2.14
USH2AO75445 RNA5SP235-201ENST00000365411 114 ntBASIC1.66□□□□□ -2.14
USH2AO75445 SNORA70.9-201ENST00000384370 135 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AL035407.1-201ENST00000429211 571 ntBASIC1.66□□□□□ -2.14
USH2AO75445 OR52E3P-201ENST00000452083 936 ntBASIC1.66□□□□□ -2.14
USH2AO75445 HMGN2P7-201ENST00000456186 273 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AL445433.1-201ENST00000457507 257 ntBASIC1.66□□□□□ -2.14
USH2AO75445 RN7SL197P-201ENST00000466981 299 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AC084198.1-201ENST00000477747 402 ntBASIC1.66□□□□□ -2.14
USH2AO75445 RNU4-29P-201ENST00000515943 174 ntBASIC1.66□□□□□ -2.14
USH2AO75445 RNU4ATAC18P-201ENST00000516179 126 ntBASIC1.66□□□□□ -2.14
USH2AO75445 OSBPL9P2-201ENST00000526582 1228 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC1.66□□□□□ -2.14
USH2AO75445 MIR4435-1-201ENST00000582552 80 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.66□□□□□ -2.14
USH2AO75445 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC1.66□□□□□ -2.14
USH2AO75445 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
USH2AO75445 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
USH2AO75445 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 AL450338.1-201ENST00000407987 512 ntBASIC1.66□□□□□ -2.14
USH2AO75445 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 AL121878.1-201ENST00000418638 859 ntBASIC1.66□□□□□ -2.14
USH2AO75445 BTF3P9-201ENST00000418784 283 ntBASIC1.66□□□□□ -2.14
USH2AO75445 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC1.66□□□□□ -2.14
USH2AO75445 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC1.66□□□□□ -2.14
USH2AO75445 AC023141.12-201ENST00000512399 199 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AC010374.2-201ENST00000512933 535 ntBASIC1.66□□□□□ -2.14
USH2AO75445 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
USH2AO75445 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms