Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SDC3O75056 AL445363.3-201ENST00000623080 671 ntBASIC4.26□□□□□ -1.73
SDC3O75056 AC112484.5-201ENST00000624189 228 ntBASIC4.26□□□□□ -1.73
SDC3O75056 AC008785.1-201ENST00000624475 456 ntBASIC4.26□□□□□ -1.73
SDC3O75056 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.26□□□□□ -1.73
SDC3O75056 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SDC3O75056 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SDC3O75056 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.26□□□□□ -1.73
SDC3O75056 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.26□□□□□ -1.73
SDC3O75056 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SDC3O75056 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SDC3O75056 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.26□□□□□ -1.73
SDC3O75056 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.25□□□□□ -1.73
SDC3O75056 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SDC3O75056 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.25□□□□□ -1.73
SDC3O75056 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SDC3O75056 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
SDC3O75056 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SDC3O75056 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SDC3O75056 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
SDC3O75056 RNA5SP372-201ENST00000390836 115 ntBASIC4.25□□□□□ -1.73
SDC3O75056 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SDC3O75056 AL445189.1-201ENST00000405722 338 ntBASIC4.25□□□□□ -1.73
SDC3O75056 RNU4-74P-201ENST00000411280 161 ntBASIC4.25□□□□□ -1.73
SDC3O75056 CEACAMP8-201ENST00000413902 580 ntBASIC4.25□□□□□ -1.73
SDC3O75056 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.25□□□□□ -1.73
SDC3O75056 LINC01881-201ENST00000416103 412 ntBASIC4.25□□□□□ -1.73
SDC3O75056 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.25□□□□□ -1.73
SDC3O75056 SEC63P1-201ENST00000425785 1258 ntBASIC4.25□□□□□ -1.73
SDC3O75056 AL138785.1-201ENST00000425821 331 ntBASIC4.25□□□□□ -1.73
SDC3O75056 COX6CP15-201ENST00000426313 211 ntBASIC4.25□□□□□ -1.73
SDC3O75056 MTATP6P11-201ENST00000428071 670 ntBASIC4.25□□□□□ -1.73
SDC3O75056 AL117339.2-201ENST00000430475 180 ntBASIC4.25□□□□□ -1.73
SDC3O75056 RPS24P8-201ENST00000431490 402 ntBASIC4.25□□□□□ -1.73
SDC3O75056 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SDC3O75056 ARL4AP4-201ENST00000434170 518 ntBASIC4.25□□□□□ -1.73
SDC3O75056 MTND4P15-201ENST00000437913 1033 ntBASIC4.25□□□□□ -1.73
SDC3O75056 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.25□□□□□ -1.73
SDC3O75056 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.25□□□□□ -1.73
SDC3O75056 MRPL48P1-201ENST00000445390 636 ntBASIC4.25□□□□□ -1.73
SDC3O75056 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.25□□□□□ -1.73
SDC3O75056 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.25□□□□□ -1.73
SDC3O75056 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.25□□□□□ -1.73
SDC3O75056 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.25□□□□□ -1.73
SDC3O75056 MTND4LP31-201ENST00000514859 294 ntBASIC4.25□□□□□ -1.73
SDC3O75056 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.25□□□□□ -1.73
SDC3O75056 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.25□□□□□ -1.73
SDC3O75056 AC024341.1-201ENST00000526444 1552 ntBASIC4.25□□□□□ -1.73
SDC3O75056 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SDC3O75056 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.25□□□□□ -1.73
SDC3O75056 RPL21P7-201ENST00000557463 483 ntBASIC4.25□□□□□ -1.73
SDC3O75056 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.25□□□□□ -1.73
SDC3O75056 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.25□□□□□ -1.73
SDC3O75056 RN7SL600P-201ENST00000581811 299 ntBASIC4.25□□□□□ -1.73
SDC3O75056 AC093227.2-201ENST00000589357 285 ntBASIC4.25□□□□□ -1.73
SDC3O75056 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.25□□□□□ -1.73
SDC3O75056 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.25□□□□□ -1.73
SDC3O75056 AC005520.3-201ENST00000602874 370 ntBASIC4.25□□□□□ -1.73
SDC3O75056 AL161729.3-201ENST00000603533 673 ntBASIC4.25□□□□□ -1.73
SDC3O75056 AL160290.3-201ENST00000604869 165 ntBASIC4.25□□□□□ -1.73
SDC3O75056 COX6CP4-201ENST00000605798 228 ntBASIC4.25□□□□□ -1.73
SDC3O75056 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.25□□□□□ -1.73
SDC3O75056 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
SDC3O75056 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
SDC3O75056 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.25□□□□□ -1.73
SDC3O75056 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.25□□□□□ -1.73
SDC3O75056 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.25□□□□□ -1.73
SDC3O75056 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SDC3O75056 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
SDC3O75056 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SDC3O75056 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SDC3O75056 AL049555.1-201ENST00000562834 1933 ntBASIC4.25□□□□□ -1.73
SDC3O75056 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SDC3O75056 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SDC3O75056 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.24□□□□□ -1.73
SDC3O75056 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SDC3O75056 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SDC3O75056 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SDC3O75056 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SDC3O75056 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.24□□□□□ -1.73
SDC3O75056 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SDC3O75056 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SDC3O75056 AL118496.1-201ENST00000440201 1812 ntBASIC4.24□□□□□ -1.73
SDC3O75056 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SDC3O75056 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
SDC3O75056 RNU1-83P-201ENST00000363426 164 ntBASIC4.24□□□□□ -1.73
SDC3O75056 RNA5SP175-201ENST00000364275 119 ntBASIC4.24□□□□□ -1.73
SDC3O75056 SNORD96B-201ENST00000386148 79 ntBASIC4.24□□□□□ -1.73
SDC3O75056 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SDC3O75056 HDGFP1-201ENST00000405943 252 ntBASIC4.24□□□□□ -1.73
SDC3O75056 EIF4EP1-201ENST00000422311 642 ntBASIC4.24□□□□□ -1.73
SDC3O75056 Z74021.1-201ENST00000423610 407 ntBASIC4.24□□□□□ -1.73
SDC3O75056 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.24□□□□□ -1.73
SDC3O75056 COX6B1P7-201ENST00000430845 235 ntBASIC4.24□□□□□ -1.73
SDC3O75056 BTF3P10-201ENST00000433415 495 ntBASIC4.24□□□□□ -1.73
SDC3O75056 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.24□□□□□ -1.73
SDC3O75056 AC114495.1-201ENST00000441274 436 ntBASIC4.24□□□□□ -1.73
SDC3O75056 AC007000.2-201ENST00000442564 487 ntBASIC4.24□□□□□ -1.73
SDC3O75056 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.24□□□□□ -1.73
SDC3O75056 TPMTP4-201ENST00000450749 678 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms