Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.77□□□□□ -1.65
SMAD6O43541 AC079610.2-201ENST00000604818 690 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 AC015722.2-201ENST00000622210 551 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.77□□□□□ -1.65
SMAD6O43541 AP001642.1-201ENST00000624727 2117 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.77□□□□□ -1.65
SMAD6O43541 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.77□□□□□ -1.65
SMAD6O43541 AL034370.1-201ENST00000397254 1590 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
SMAD6O43541 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SMAD6O43541 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMAD6O43541 AC096656.1-201ENST00000623826 1364 ntBASIC4.77□□□□□ -1.65
SMAD6O43541 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMAD6O43541 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.77□□□□□ -1.65
SMAD6O43541 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SMAD6O43541 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SMAD6O43541 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SMAD6O43541 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SMAD6O43541 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SMAD6O43541 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SMAD6O43541 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SMAD6O43541 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SMAD6O43541 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SMAD6O43541 RNU4-68P-201ENST00000364314 141 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SMAD6O43541 SNORD116-9-201ENST00000384000 95 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 SNORD116-3-201ENST00000384287 95 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 SNORD116-7-201ENST00000384404 95 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 SNORD116-5-201ENST00000384462 95 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 RNA5SP332-201ENST00000391063 115 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 RNU6-796P-201ENST00000391086 107 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 AP002784.2-201ENST00000397300 549 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 Y_RNA.599-201ENST00000410489 109 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 BTF3L4P1-201ENST00000413813 468 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.76□□□□□ -1.65
SMAD6O43541 TRGV6-201ENST00000417928 299 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SMAD6O43541 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.76□□□□□ -1.65
SMAD6O43541 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.76□□□□□ -1.65
SMAD6O43541 AL606490.7-201ENST00000433136 191 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SMAD6O43541 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.76□□□□□ -1.65
SMAD6O43541 UBE2D3P1-201ENST00000436669 444 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.76□□□□□ -1.65
SMAD6O43541 AC004938.1-201ENST00000438468 308 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 AC245517.2-201ENST00000442890 346 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.76□□□□□ -1.65
SMAD6O43541 H2AFZP5-201ENST00000446960 382 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 RAB28P3-201ENST00000448325 597 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 AL133217.1-201ENST00000450980 425 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 USP9YP10-201ENST00000454868 628 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.76□□□□□ -1.65
SMAD6O43541 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.76□□□□□ -1.65
SMAD6O43541 RPL36AP41-201ENST00000493820 306 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 MTCYBP16-201ENST00000509187 1129 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 USP9YP5-201ENST00000511770 630 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 AC067904.2-201ENST00000517322 1283 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.76□□□□□ -1.65
SMAD6O43541 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.76□□□□□ -1.65
SMAD6O43541 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.76□□□□□ -1.65
SMAD6O43541 OR4A2P-201ENST00000527276 913 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SMAD6O43541 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.76□□□□□ -1.65
SMAD6O43541 AP000916.1-201ENST00000533869 835 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
SMAD6O43541 AC023050.2-201ENST00000544968 387 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.76□□□□□ -1.65
SMAD6O43541 AC090515.3-201ENST00000560431 315 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 AC104229.1-201ENST00000561364 255 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.76□□□□□ -1.65
SMAD6O43541 AC068790.4-201ENST00000602474 263 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.76□□□□□ -1.65
SMAD6O43541 AL360219.1-201ENST00000610230 366 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 AC116447.1-201ENST00000613153 453 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.76□□□□□ -1.65
SMAD6O43541 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.76□□□□□ -1.65
SMAD6O43541 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.76□□□□□ -1.65
SMAD6O43541 CASC19-284ENST00000642142 1868 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SMAD6O43541 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SMAD6O43541 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SMAD6O43541 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SMAD6O43541 AL132640.2-201ENST00000559968 1698 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SMAD6O43541 AC005261.4-201ENST00000600047 1385 ntBASIC4.76□□□□□ -1.65
SMAD6O43541 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.76□□□□□ -1.65
SMAD6O43541 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SMAD6O43541 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SMAD6O43541 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SMAD6O43541 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SMAD6O43541 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SMAD6O43541 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SMAD6O43541 AC008432.1-201ENST00000615912 1320 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SMAD6O43541 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.75□□□□□ -1.65
SMAD6O43541 DHX40P1-201ENST00000588725 1412 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SMAD6O43541 Z95331.1-201ENST00000623075 23112 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AC010132.2-201ENST00000295493 1043 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms