Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MIR1302-8-201ENST00000408342 128 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM38O00635 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRIM38O00635 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM38O00635 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM38O00635 OR4K6P-201ENST00000416478 897 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AL807761.1-201ENST00000417622 171 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM38O00635 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM38O00635 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM38O00635 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM38O00635 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM38O00635 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 MTCO2P7-201ENST00000446518 666 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 NPM1P49-201ENST00000448027 714 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM38O00635 AC233982.1-201ENST00000451247 436 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 RPL21P71-201ENST00000465598 459 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM38O00635 AC097484.1-201ENST00000471148 389 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 MTCO3P35-201ENST00000485582 781 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM38O00635 HIGD1AP6-201ENST00000521833 279 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM38O00635 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM38O00635 ELOCP28-201ENST00000590044 317 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AC021171.1-201ENST00000603137 706 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AC091488.1-201ENST00000604239 660 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AL355073.2-201ENST00000612106 557 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AC009318.3-201ENST00000616916 503 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM38O00635 AC087385.3-201ENST00000620477 187 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM38O00635 AL157770.1-201ENST00000623049 439 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AC091905.4-201ENST00000623432 202 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AP003400.3-201ENST00000624904 346 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 MIR3974-201ENST00000637126 96 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM38O00635 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM38O00635 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRIM38O00635 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM38O00635 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM38O00635 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM38O00635 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM38O00635 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM38O00635 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM38O00635 DBF4P1-201ENST00000412976 1892 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM38O00635 CASC19-206ENST00000641028 1430 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 AC095050.2-201ENST00000510748 1458 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM38O00635 AL672167.1-204ENST00000641875 3017 ntBASIC5.13□□□□□ -1.59
TRIM38O00635 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM38O00635 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TRIM38O00635 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
TRIM38O00635 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM38O00635 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM38O00635 RNU6-707P-201ENST00000364647 95 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 SNORA40.2-201ENST00000390847 128 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 NUDT19P3-201ENST00000404698 555 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 RPL31P52-201ENST00000407532 367 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 RN7SKP16-201ENST00000410180 299 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 Y_RNA.604-201ENST00000410574 102 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM38O00635 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM38O00635 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM38O00635 AL356320.2-201ENST00000417263 507 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 HMGB1P49-201ENST00000418882 569 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 OR6C64P-201ENST00000419708 825 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM38O00635 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM38O00635 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM38O00635 MTCO1P3-201ENST00000429327 192 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 NANOGP2-201ENST00000435391 727 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM38O00635 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM38O00635 CEACAMP9-201ENST00000442990 513 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM38O00635 RPS27AP15-201ENST00000447672 466 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM38O00635 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM38O00635 PPIAP21-201ENST00000464473 501 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 AC092324.1-201ENST00000468671 324 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 AC004263.1-201ENST00000479327 332 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM38O00635 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM38O00635 RNU5A-4P-201ENST00000516588 111 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 MTND4LP18-201ENST00000526864 291 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM38O00635 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
TRIM38O00635 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM38O00635 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM38O00635 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM38O00635 AC110743.1-201ENST00000584870 478 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM38O00635 NF1P5-201ENST00000588287 448 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM38O00635 AL139344.1-201ENST00000605228 195 ntBASIC5.12□□□□□ -1.59
TRIM38O00635 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM38O00635 AP000255.1-201ENST00000610276 676 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms