Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AP000943.4-201ENST00000622912 357 ntBASIC4.41□□□□□ -1.7
RTCAO00442 AC068880.4-201ENST00000623082 495 ntBASIC4.41□□□□□ -1.7
RTCAO00442 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.41□□□□□ -1.7
RTCAO00442 AC138649.5-201ENST00000637456 137 ntBASIC4.41□□□□□ -1.7
RTCAO00442 AC106858.1-201ENST00000637497 429 ntBASIC4.41□□□□□ -1.7
RTCAO00442 AC017104.5-201ENST00000637647 639 ntBASIC4.41□□□□□ -1.7
RTCAO00442 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTCAO00442 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.41□□□□□ -1.7
RTCAO00442 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.41□□□□□ -1.7
RTCAO00442 ZFRP1-201ENST00000457579 2970 ntBASIC4.41□□□□□ -1.7
RTCAO00442 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTCAO00442 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RTCAO00442 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTCAO00442 MAPK10-303ENST00000641324 3959 ntBASIC4.4□□□□□ -1.7
RTCAO00442 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
RTCAO00442 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTCAO00442 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTCAO00442 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
RTCAO00442 AC103591.2-201ENST00000265259 766 ntBASIC4.4□□□□□ -1.71
RTCAO00442 RNU6-543P-201ENST00000362576 108 ntBASIC4.4□□□□□ -1.71
RTCAO00442 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.4□□□□□ -1.71
RTCAO00442 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RTCAO00442 MIR3074-201ENST00000384885 81 ntBASIC4.4□□□□□ -1.71
RTCAO00442 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RTCAO00442 RNU6-1176P-201ENST00000390955 107 ntBASIC4.4□□□□□ -1.71
RTCAO00442 ATP5F1P6-201ENST00000402768 767 ntBASIC4.4□□□□□ -1.71
RTCAO00442 AL121834.1-202ENST00000404494 277 ntBASIC4.4□□□□□ -1.71
RTCAO00442 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.4□□□□□ -1.71
RTCAO00442 RN7SKP106-201ENST00000410832 272 ntBASIC4.4□□□□□ -1.71
RTCAO00442 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.4□□□□□ -1.71
RTCAO00442 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.4□□□□□ -1.71
RTCAO00442 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.4□□□□□ -1.71
RTCAO00442 PSMA2P3-201ENST00000429685 675 ntBASIC4.4□□□□□ -1.71
RTCAO00442 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.4□□□□□ -1.71
RTCAO00442 AL049745.1-201ENST00000433953 286 ntBASIC4.4□□□□□ -1.71
RTCAO00442 RPL23AP33-201ENST00000442301 452 ntBASIC4.4□□□□□ -1.71
RTCAO00442 Z80107.2-201ENST00000445127 392 ntBASIC4.4□□□□□ -1.71
RTCAO00442 BX276092.4-201ENST00000452056 248 ntBASIC4.4□□□□□ -1.71
RTCAO00442 RPL5P32-201ENST00000454085 879 ntBASIC4.4□□□□□ -1.71
RTCAO00442 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.4□□□□□ -1.71
RTCAO00442 snoU13.7-201ENST00000459220 104 ntBASIC4.4□□□□□ -1.71
RTCAO00442 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.4□□□□□ -1.71
RTCAO00442 AC011005.3-201ENST00000491624 395 ntBASIC4.4□□□□□ -1.71
RTCAO00442 AC092045.1-201ENST00000495716 1231 ntBASIC4.4□□□□□ -1.71
RTCAO00442 MTND3P3-201ENST00000505004 126 ntBASIC4.4□□□□□ -1.71
RTCAO00442 AC016550.1-201ENST00000505348 785 ntBASIC4.4□□□□□ -1.71
RTCAO00442 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.4□□□□□ -1.71
RTCAO00442 AC008885.2-201ENST00000509506 930 ntBASIC4.4□□□□□ -1.71
RTCAO00442 AC093755.1-201ENST00000512950 1023 ntBASIC4.4□□□□□ -1.71
RTCAO00442 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.4□□□□□ -1.71
RTCAO00442 RN7SKP46-201ENST00000515942 234 ntBASIC4.4□□□□□ -1.71
RTCAO00442 RNA5SP309-201ENST00000516670 106 ntBASIC4.4□□□□□ -1.71
RTCAO00442 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.4□□□□□ -1.71
RTCAO00442 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.4□□□□□ -1.71
RTCAO00442 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
RTCAO00442 UBTFL9-201ENST00000534504 1148 ntBASIC4.4□□□□□ -1.71
RTCAO00442 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.4□□□□□ -1.71
RTCAO00442 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.4□□□□□ -1.71
RTCAO00442 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.4□□□□□ -1.71
RTCAO00442 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.4□□□□□ -1.71
RTCAO00442 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.4□□□□□ -1.71
RTCAO00442 uc_338.32-201ENST00000615087 172 ntBASIC4.4□□□□□ -1.71
RTCAO00442 AC100827.5-201ENST00000615883 426 ntBASIC4.4□□□□□ -1.71
RTCAO00442 FRG1HP-204ENST00000617940 757 ntBASIC4.4□□□□□ -1.71
RTCAO00442 AC018926.3-201ENST00000618841 406 ntBASIC4.4□□□□□ -1.71
RTCAO00442 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.4□□□□□ -1.71
RTCAO00442 U3.53-201ENST00000628922 216 ntBASIC4.4□□□□□ -1.71
RTCAO00442 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.4□□□□□ -1.71
RTCAO00442 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.4□□□□□ -1.71
RTCAO00442 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.4□□□□□ -1.71
RTCAO00442 AL592494.2-201ENST00000425455 1548 ntBASIC4.4□□□□□ -1.71
RTCAO00442 AC104446.1-201ENST00000613728 1321 ntBASIC4.4□□□□□ -1.71
RTCAO00442 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.4□□□□□ -1.71
RTCAO00442 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.4□□□□□ -1.71
RTCAO00442 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.4□□□□□ -1.71
RTCAO00442 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
RTCAO00442 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.39□□□□□ -1.71
RTCAO00442 AC135352.1-201ENST00000506173 1418 ntBASIC4.39□□□□□ -1.71
RTCAO00442 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTCAO00442 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
RTCAO00442 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RTCAO00442 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RTCAO00442 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTCAO00442 ENSAP3-201ENST00000312710 333 ntBASIC4.39□□□□□ -1.71
RTCAO00442 OR56B2P-201ENST00000317102 954 ntBASIC4.39□□□□□ -1.71
RTCAO00442 SNORA63.3-201ENST00000362682 132 ntBASIC4.39□□□□□ -1.71
RTCAO00442 SNORD96B-201ENST00000386148 79 ntBASIC4.39□□□□□ -1.71
RTCAO00442 AL035419.1-201ENST00000397037 564 ntBASIC4.39□□□□□ -1.71
RTCAO00442 EIF5P1-201ENST00000400019 1231 ntBASIC4.39□□□□□ -1.71
RTCAO00442 AL035405.1-201ENST00000400795 710 ntBASIC4.39□□□□□ -1.71
RTCAO00442 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.39□□□□□ -1.71
RTCAO00442 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.39□□□□□ -1.71
RTCAO00442 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.39□□□□□ -1.71
RTCAO00442 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.39□□□□□ -1.71
RTCAO00442 RPL7P53-201ENST00000421245 739 ntBASIC4.39□□□□□ -1.71
RTCAO00442 Z74021.1-201ENST00000423610 407 ntBASIC4.39□□□□□ -1.71
RTCAO00442 GTF2IP2-201ENST00000424290 697 ntBASIC4.39□□□□□ -1.71
RTCAO00442 AC012519.1-201ENST00000424588 610 ntBASIC4.39□□□□□ -1.71
RTCAO00442 OR4F13P-201ENST00000428478 931 ntBASIC4.39□□□□□ -1.71
RTCAO00442 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms