Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC090312.1-201ENST00000580637 348 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AP000919.1-202ENST00000581139 1264 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 EIF1P6-201ENST00000600054 334 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 NTAN1P1-201ENST00000603150 646 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC090948.2-201ENST00000607363 564 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AL133243.1-201ENST00000614487 366 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC009318.3-201ENST00000616916 503 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AL121890.3-201ENST00000618494 516 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AP005019.3-201ENST00000620418 560 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AP003072.4-201ENST00000624580 310 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 CDRT1-208ENST00000630868 794 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC017104.5-201ENST00000637647 639 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC006927.2-201ENST00000639256 389 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 LINC01808-202ENST00000641680 1116 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 CYP1D1P-201ENST00000416662 1433 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC134882.1-201ENST00000603738 1676 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AC073055.1-201ENST00000456901 1621 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 RNU5B-4P-201ENST00000363508 111 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 ARL4AP5-201ENST00000404372 599 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 IPMKP1-201ENST00000425988 855 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AL732292.1-201ENST00000426692 226 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AC009263.1-201ENST00000441193 1239 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 FTH1P2-201ENST00000466086 412 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 RPL36AP41-201ENST00000493820 306 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 NF1P5-201ENST00000588287 448 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AC124016.2-201ENST00000610058 665 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AC006338.2-201ENST00000616864 791 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AL512427.1-201ENST00000618593 349 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AL672167.1-205ENST00000641112 3080 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AL031119.1-201ENST00000404707 1879 ntBASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA3F8WFD2 AC025031.4-201ENST00000621248 3271 ntBASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 AC083899.2-201ENST00000423285 1376 ntBASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 OR56B2P-202ENST00000641377 2453 ntBASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 FAM3C2-201ENST00000312214 681 ntBASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 SNORA70.2-201ENST00000364506 135 ntBASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 RNU6-1000P-201ENST00000391066 106 ntBASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 RNU6-932P-201ENST00000391108 106 ntBASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 SNORA11C-201ENST00000408532 129 ntBASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 ELOCP19-201ENST00000411919 318 ntBASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 UBE2V1P9-201ENST00000414760 368 ntBASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 RPL7P57-201ENST00000423238 740 ntBASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 RPS6P14-201ENST00000425165 719 ntBASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.17□□□□□ -1.74
NPIPA3F8WFD2 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms