Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 RNU4-12P-201ENST00000365233 139 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 Y_RNA.408-201ENST00000383987 102 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 RNU6-146P-201ENST00000384602 108 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 SNORD65.1-201ENST00000390889 71 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 FGF7P8-201ENST00000402994 292 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 CIR1P3-201ENST00000405137 479 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 MIR1277-201ENST00000408536 78 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 PIGPP2-201ENST00000411569 458 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 MTATP6P27-201ENST00000416987 621 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 RPL12P34-201ENST00000424532 479 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AL158073.1-201ENST00000426848 1104 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC126120.1-201ENST00000431082 470 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AL050321.1-201ENST00000432363 400 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC138761.5-201ENST00000433967 325 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 RPS25P9-201ENST00000435591 252 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 RPL12P46-201ENST00000436610 195 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AL662791.1-201ENST00000441992 928 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AL589765.3-201ENST00000446084 462 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 MEMO1P4-201ENST00000453590 386 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC118758.1-202ENST00000454719 225 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 RPS23P2-201ENST00000463671 415 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC079841.1-201ENST00000481228 950 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 VPS26AP1-201ENST00000483197 979 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 RPL32P33-201ENST00000487023 394 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AL358832.1-201ENST00000497800 389 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 FAM92A1P2-202ENST00000504766 877 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC074255.1-201ENST00000511259 501 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC046134.1-201ENST00000514454 666 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 RNU6-1225P-201ENST00000516336 65 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 RNU6-941P-201ENST00000516346 108 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC104383.1-201ENST00000530297 370 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AP002453.2-201ENST00000533503 320 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 GLYCAM1-201ENST00000546596 285 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 HSPE1P2-201ENST00000554777 306 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC104964.3-201ENST00000606115 2860 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AL354685.2-201ENST00000448218 1447 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 AC068870.1-201ENST00000563737 2455 ntBASIC4.52□□□□□ -1.69
CGB1A6NKQ9 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.52□□□□□ -1.69
CGB1A6NKQ9 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CGB1A6NKQ9 ASNSP1-204ENST00000641977 1664 ntBASIC4.51□□□□□ -1.69
CGB1A6NKQ9 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CGB1A6NKQ9 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CGB1A6NKQ9 PABPC1P9-201ENST00000426076 1612 ntBASIC4.51□□□□□ -1.69
CGB1A6NKQ9 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CGB1A6NKQ9 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CGB1A6NKQ9 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.51□□□□□ -1.69
CGB1A6NKQ9 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CGB1A6NKQ9 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CGB1A6NKQ9 HMGB1P5-201ENST00000255320 642 ntBASIC4.51□□□□□ -1.69
CGB1A6NKQ9 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CGB1A6NKQ9 AL121886.1-201ENST00000358609 435 ntBASIC4.51□□□□□ -1.69
CGB1A6NKQ9 RNU6-660P-201ENST00000364566 109 ntBASIC4.51□□□□□ -1.69
CGB1A6NKQ9 Y_RNA.256-201ENST00000364594 104 ntBASIC4.51□□□□□ -1.69
CGB1A6NKQ9 Y_RNA.302-201ENST00000364997 102 ntBASIC4.51□□□□□ -1.69
CGB1A6NKQ9 XGY1-201ENST00000381172 446 ntBASIC4.51□□□□□ -1.69
CGB1A6NKQ9 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CGB1A6NKQ9 CYCSP45-201ENST00000402289 315 ntBASIC4.51□□□□□ -1.69
CGB1A6NKQ9 MIR1203-201ENST00000408812 85 ntBASIC4.51□□□□□ -1.69
CGB1A6NKQ9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms