Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 FAM133CP-201ENST00000332869 704 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 RNU1-20P-201ENST00000363314 162 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 RNU6-619P-201ENST00000365146 108 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 OR52E6-202ENST00000379946 954 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AL589647.1-201ENST00000402485 466 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 MIR1178-201ENST00000408396 91 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AL591848.1-201ENST00000413092 322 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 MTCO1P3-201ENST00000429327 192 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 TXNL1P1-201ENST00000429528 554 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AL008629.1-201ENST00000438615 184 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AC090142.1-201ENST00000465776 462 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 FABP5P12-201ENST00000515543 389 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 IGKV2-36-201ENST00000519999 223 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 COX6B1P6-201ENST00000522347 255 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AP001880.2-201ENST00000538233 448 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AC018552.1-201ENST00000562099 811 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 VN1R84P-201ENST00000593697 235 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 NTAN1P1-201ENST00000603150 646 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 DPRXP5-201ENST00000604662 539 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AC091979.2-201ENST00000607514 214 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AP003392.5-201ENST00000607857 415 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AC093783.1-201ENST00000612976 329 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AC018926.3-201ENST00000618841 406 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AC087385.3-201ENST00000620477 187 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 AC078883.4-201ENST00000623218 367 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 EOGT-210ENST00000615922 1931 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 ASNSP1-204ENST00000641977 1664 ntBASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TCRBV7S3A2A0A539 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AL391684.1-202ENST00000641293 1636 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 BX005019.1-201ENST00000561881 1810 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AC010329.2-201ENST00000595195 2737 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 RNU6-560P-201ENST00000364007 108 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 SNORA51.8-201ENST00000384234 132 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 RNU5A-2P-201ENST00000384337 116 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 RN7SKP213-201ENST00000410746 298 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AL031663.1-201ENST00000437445 219 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 FGF7P5-201ENST00000441829 291 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 MTND2P22-201ENST00000444325 1033 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AC079776.3-201ENST00000450665 370 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AC026348.1-201ENST00000462549 1053 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AC005912.1-201ENST00000495392 255 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AC010486.2-201ENST00000505572 483 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AC008562.1-201ENST00000521763 330 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 C1GALT1P3-201ENST00000522049 819 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 OR4C2P-201ENST00000530855 1064 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AC087465.1-201ENST00000560574 245 ntBASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.72□□□□□ -1.65
TCRBV7S3A2A0A539 AL390726.5-202ENST00000564800 256 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms