Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.41□□□□□ -1.86
TRAV27A0A087WT01 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRAV27A0A087WT01 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
TRAV27A0A087WT01 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRAV27A0A087WT01 AL031985.3-201ENST00000565390 2449 ntBASIC3.41□□□□□ -1.86
TRAV27A0A087WT01 AL627171.1-201ENST00000618845 1308 ntBASIC3.41□□□□□ -1.86
TRAV27A0A087WT01 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.41□□□□□ -1.86
TRAV27A0A087WT01 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.4□□□□□ -1.86
TRAV27A0A087WT01 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRAV27A0A087WT01 FAM91A3P-201ENST00000456826 2544 ntBASIC3.4□□□□□ -1.86
TRAV27A0A087WT01 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.4□□□□□ -1.86
TRAV27A0A087WT01 Z73965.1-201ENST00000623412 2297 ntBASIC3.4□□□□□ -1.86
TRAV27A0A087WT01 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
TRAV27A0A087WT01 AC093719.1-202ENST00000392735 373 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 RPS26P47-201ENST00000427219 348 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 YY1P1-201ENST00000427625 668 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 RPL7P4-203ENST00000430239 730 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 HMGB3P10-201ENST00000434734 572 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 SKP1P1-201ENST00000438081 489 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 AP000936.3-201ENST00000438127 255 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 AC022431.1-201ENST00000450941 438 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 MTCO3P16-201ENST00000454456 754 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 CYCSP53-201ENST00000455540 265 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 AL133244.1-201ENST00000456007 258 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 RN7SKP122-201ENST00000515923 296 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 RNU6-352P-201ENST00000516908 107 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 AC015911.5-201ENST00000587076 451 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 SNORA62.6-201ENST00000606322 83 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 MIR6715B-201ENST00000637172 77 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 AC233968.1-201ENST00000611212 1300 ntBASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.4□□□□□ -1.87
TRAV27A0A087WT01 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AC073073.2-201ENST00000609827 2578 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AP000756.2-201ENST00000624168 2567 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 MIR372-201ENST00000362225 67 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 RNA5SP502-201ENST00000362694 119 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 RNU1-13P-201ENST00000384499 162 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AC013268.2-201ENST00000420753 337 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 FAR2P4-202ENST00000425399 584 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 MOB1AP1-201ENST00000430903 535 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 RPS20P1-201ENST00000434853 354 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 EIF4A1P11-201ENST00000451239 222 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AC243772.1-201ENST00000451620 410 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AC090281.1-201ENST00000523019 276 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 DEFB109D-201ENST00000529497 240 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AC067838.1-201ENST00000606064 577 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 AC244205.2-202ENST00000635781 342 ntBASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRAV27A0A087WT01 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 SPRR2C-201ENST00000290702 219 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 U1.1-201ENST00000384101 164 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AL049693.1-201ENST00000402760 611 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 RAC1P3-201ENST00000416129 580 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 AL117339.2-201ENST00000430475 180 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 RPS6P12-201ENST00000432491 726 ntBASIC3.38□□□□□ -1.87
TRAV27A0A087WT01 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms