Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 RPS27AP17-201ENST00000463344 455 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 RPS26P28-201ENST00000470806 348 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AL035404.1-201ENST00000497982 568 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC111000.3-201ENST00000508057 576 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC005351.1-201ENST00000511152 786 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 IGLV3-26-201ENST00000520756 302 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC137768.1-201ENST00000549998 553 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC084783.1-201ENST00000565846 910 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 RPL23AP97-201ENST00000568955 471 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 MTND6P33-201ENST00000571794 183 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AP001180.3-201ENST00000582221 145 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC020634.1-201ENST00000608701 549 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC099669.2-201ENST00000616549 437 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AL138721.1-201ENST00000616756 179 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC009237.17-201ENST00000618111 748 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 OR56B2P-202ENST00000641377 2453 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 KPNA2P2-201ENST00000419546 1489 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 AC012020.1-201ENST00000624541 1728 ntBASIC4.04□□□□□ -1.76
CHRNA9Q9UGM1 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AC067945.1-201ENST00000342609 618 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 MIR129-1-201ENST00000384972 72 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AL353692.2-201ENST00000407054 335 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 VN1R8P-201ENST00000407739 893 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AC073310.1-201ENST00000423226 1033 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 EIF2S2P3-201ENST00000428356 999 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 MTND4LP7-201ENST00000431728 294 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 ARL5AP2-201ENST00000444698 533 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 YWHAQP9-201ENST00000445891 512 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AC015795.1-201ENST00000513669 327 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 RN7SKP92-201ENST00000517266 244 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AC010306.1-201ENST00000523223 1117 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 LINC00557-201ENST00000563184 1279 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AC115286.1-201ENST00000604298 434 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 STMN1P1-201ENST00000617809 440 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 MIR7703-201ENST00000620784 77 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 AC007546.2-201ENST00000623996 360 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 XPOTP1-201ENST00000443317 2398 ntBASIC4.03□□□□□ -1.76
CHRNA9Q9UGM1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.77
CHRNA9Q9UGM1 RAD17P1-201ENST00000418130 2042 ntBASIC4.02□□□□□ -1.77
CHRNA9Q9UGM1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHRNA9Q9UGM1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
CHRNA9Q9UGM1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CHRNA9Q9UGM1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CHRNA9Q9UGM1 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CHRNA9Q9UGM1 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CHRNA9Q9UGM1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CHRNA9Q9UGM1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHRNA9Q9UGM1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CHRNA9Q9UGM1 MIR585-201ENST00000384887 94 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms