Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SNRPEP3-201ENST00000338402 276 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 RN7SKP160-201ENST00000363804 340 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 RNU6-660P-201ENST00000364566 109 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 BX323845.3-201ENST00000428215 527 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 RPL7P56-201ENST00000429441 717 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 BMS1P19-201ENST00000433925 393 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 MTND4P6-201ENST00000438297 472 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC092427.1-201ENST00000439177 601 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 RPS26P56-201ENST00000444468 240 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC239809.1-201ENST00000450470 217 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AZGP1P2-201ENST00000454506 345 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 RNU6-956P-201ENST00000458868 103 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 RN7SL72P-201ENST00000460697 269 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 RN7SL809P-201ENST00000482040 297 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 RPS23P1-201ENST00000491662 432 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC090071.1-201ENST00000507713 644 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC074255.1-201ENST00000511259 501 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 DEFB131D-201ENST00000526803 184 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC090502.2-201ENST00000549267 280 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 CYCSP2-201ENST00000558168 301 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AP005119.1-201ENST00000580956 292 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 SUMO2P15-201ENST00000604285 278 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AL391497.1-201ENST00000608671 547 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC103591.3-201ENST00000608684 209 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 Z95327.3-201ENST00000610385 572 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC018816.2-201ENST00000621460 353 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 AC092192.1-201ENST00000633154 1018 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 LINC01739-205ENST00000641890 573 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 CYP1D1P-201ENST00000416662 1433 ntBASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCM2LQ9NUG4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 RNA5SP443-201ENST00000363083 132 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 RNU1-19P-201ENST00000363306 165 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 U3.4-201ENST00000363352 213 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 RNU6-657P-201ENST00000383904 107 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 RNU6-921P-201ENST00000384361 107 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 RNU1-149P-201ENST00000390870 161 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 RPS3AP2-201ENST00000407190 754 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 PGBD4P8-201ENST00000412993 562 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AL121878.1-201ENST00000418638 859 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AC006366.1-201ENST00000422002 759 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AC005033.1-201ENST00000428904 813 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AC124944.2-201ENST00000429866 1242 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 DLGAP5P1-201ENST00000430307 464 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AC023347.2-201ENST00000433994 462 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AP000936.2-201ENST00000447151 681 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 ARPC3P2-201ENST00000457786 533 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AC010301.1-201ENST00000473936 355 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AL049874.2-201ENST00000492636 288 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 MTCYBP17-201ENST00000503579 789 ntBASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.29□□□□□ -1.56
CCM2LQ9NUG4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms