Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 SNORA62.6-201ENST00000606322 83 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 AL354760.1-201ENST00000608357 643 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC090912.3-201ENST00000609775 533 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 AL159169.2-201ENST00000610061 1269 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC131238.1-201ENST00000617135 328 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC103858.2-201ENST00000621471 543 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CISHQ9NSE2 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CISHQ9NSE2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CISHQ9NSE2 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CISHQ9NSE2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CISHQ9NSE2 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CISHQ9NSE2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CISHQ9NSE2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CISHQ9NSE2 RLIMP2-201ENST00000427891 1563 ntBASIC4.06□□□□□ -1.76
CISHQ9NSE2 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
CISHQ9NSE2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.05□□□□□ -1.76
CISHQ9NSE2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.05□□□□□ -1.76
CISHQ9NSE2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CISHQ9NSE2 AC107027.3-201ENST00000565095 3473 ntBASIC4.05□□□□□ -1.76
CISHQ9NSE2 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CISHQ9NSE2 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CISHQ9NSE2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.05□□□□□ -1.76
CISHQ9NSE2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.05□□□□□ -1.76
CISHQ9NSE2 AC098824.1-201ENST00000453565 980 ntBASIC4.05□□□□□ -1.76
CISHQ9NSE2 RPS6P2-201ENST00000454208 705 ntBASIC4.05□□□□□ -1.76
CISHQ9NSE2 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.05□□□□□ -1.76
CISHQ9NSE2 STRADBP1-201ENST00000478954 1281 ntBASIC4.05□□□□□ -1.76
CISHQ9NSE2 AC093853.1-201ENST00000515689 483 ntBASIC4.05□□□□□ -1.76
CISHQ9NSE2 SUMO2P20-201ENST00000520803 283 ntBASIC4.05□□□□□ -1.76
CISHQ9NSE2 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CISHQ9NSE2 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CISHQ9NSE2 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CISHQ9NSE2 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CISHQ9NSE2 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CISHQ9NSE2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CISHQ9NSE2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CISHQ9NSE2 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CISHQ9NSE2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CISHQ9NSE2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CISHQ9NSE2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CISHQ9NSE2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 RPL21P133-201ENST00000443666 476 ntBASIC4.04□□□□□ -1.76
CISHQ9NSE2 MTND2P25-201ENST00000449028 610 ntBASIC4.04□□□□□ -1.76
CISHQ9NSE2 RPS20P21-201ENST00000466859 343 ntBASIC4.04□□□□□ -1.76
CISHQ9NSE2 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 SYT14P1-201ENST00000481459 721 ntBASIC4.04□□□□□ -1.76
CISHQ9NSE2 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 RN7SKP141-201ENST00000516167 338 ntBASIC4.04□□□□□ -1.76
CISHQ9NSE2 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CISHQ9NSE2 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 AC067838.1-201ENST00000606064 577 ntBASIC4.04□□□□□ -1.76
CISHQ9NSE2 MIR6798-201ENST00000612887 67 ntBASIC4.04□□□□□ -1.76
CISHQ9NSE2 AC005344.1-201ENST00000613391 459 ntBASIC4.04□□□□□ -1.76
CISHQ9NSE2 AC099669.2-201ENST00000616549 437 ntBASIC4.04□□□□□ -1.76
CISHQ9NSE2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.04□□□□□ -1.76
CISHQ9NSE2 AP004289.2-201ENST00000444413 1457 ntBASIC4.04□□□□□ -1.76
CISHQ9NSE2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CISHQ9NSE2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.03□□□□□ -1.76
CISHQ9NSE2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CISHQ9NSE2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CISHQ9NSE2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CISHQ9NSE2 OR4A15-201ENST00000314706 1035 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CISHQ9NSE2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CISHQ9NSE2 SOD2P1-201ENST00000396543 562 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 RN7SKP156-201ENST00000410308 342 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.03□□□□□ -1.76
CISHQ9NSE2 MTND2P11-201ENST00000423638 648 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 AL390879.2-203ENST00000426943 1121 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 AL591419.1-201ENST00000427423 339 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 USP12PY-201ENST00000427677 1064 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 OR4F13P-201ENST00000428478 931 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 AC092809.1-201ENST00000441469 474 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.03□□□□□ -1.76
CISHQ9NSE2 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.03□□□□□ -1.76
CISHQ9NSE2 UBDP1-202ENST00000457888 382 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.03□□□□□ -1.76
CISHQ9NSE2 AC004069.2-201ENST00000505438 1114 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CISHQ9NSE2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.03□□□□□ -1.76
CISHQ9NSE2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms