Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 RPL23AP65-201ENST00000475608 468 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 RPL35P6-201ENST00000490024 372 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 OR9N1P-202ENST00000494289 481 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AL049844.2-201ENST00000604280 628 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AL021368.1-201ENST00000607490 540 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AL391834.1-201ENST00000609609 560 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AL356490.1-201ENST00000623079 479 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AC090506.2-201ENST00000624521 419 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 SNORD115-48-201ENST00000364764 76 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 RNU1-64P-201ENST00000365443 163 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 EIF4EP1-201ENST00000422311 642 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 MTND4P24-201ENST00000424002 397 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 ZNF965P-201ENST00000432501 817 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC114495.1-201ENST00000441274 436 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC089999.1-201ENST00000460336 374 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 S100A11P1-201ENST00000477525 312 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC008083.2-201ENST00000546707 476 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC005242.1-201ENST00000585658 438 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC093227.2-201ENST00000589357 285 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 SLC25A36P1-201ENST00000590111 465 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 VN1R84P-201ENST00000593697 235 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC005520.3-201ENST00000602874 370 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC009237.17-201ENST00000618111 748 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 MIR8059-201ENST00000620427 81 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC067931.1-201ENST00000624190 671 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC017104.4-201ENST00000636283 1592 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AC093311.1-201ENST00000506586 2021 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 AP001002.1-201ENST00000625148 1513 ntBASIC4.51□□□□□ -1.69
HPS4Q9NQG7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HPS4Q9NQG7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 SPRR2C-201ENST00000290702 219 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 MIR372-201ENST00000362225 67 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 RNU1-108P-201ENST00000362556 161 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 SNORD51.1-201ENST00000365405 77 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 FCF1P5-201ENST00000406490 482 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 RNA5SP498-201ENST00000411342 120 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 MFSD13B-201ENST00000420133 1290 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 OR2X1P-201ENST00000421144 687 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 COX6CP15-201ENST00000426313 211 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 AL132765.1-201ENST00000434165 553 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 UBE2V1P3-201ENST00000439651 417 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.5□□□□□ -1.69
HPS4Q9NQG7 HSFY6P-201ENST00000445573 403 ntBASIC4.5□□□□□ -1.69
HPS4Q9NQG7 AL359073.1-201ENST00000448036 403 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms